Gene Tcr_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0471 
Symbol 
ID3761572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp527715 
End bp528782 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content42% 
IMG OID637785182 
ProductATP-binding region, ATPase-like 
Protein accessionYP_390741 
Protein GI78484816 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000021987 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAG AGTGGGCGGG TGAACTGGCT TTTAGCGCCA TTTTAATAGG GTTGACGTTA 
ATCCTGGTGG TTTGGTATCT GCATGCTCAA AGTCGACGAC TGAAAAAAGC GATTTTAGAA
CTGTATGAAG CGAATAGGGC GGTTAACCAG GATGCCTTGG ATTTTGTTGA CCAGGCCTGG
CCAATTTTAA ACGCCGCGGG CTTTAAGGGG ATGAAAGGGC AAATTACATG GTTTGGAGAG
GTTAAACAGA TTGAAAAAGG AAAAGAAGCC GCACTGTCTT ATCCAGTGAA TTTGGCTGAA
GGTGGTATGG ATTTTCAGTT GCTGGTCGCG GCCCCACGTT TAAGAGGTGA AAAAAAGCTT
TTTGCGCAAT TGATTTTCCA AACGTTTAAA TCGCTGTTGG TGTTGGATGT CAGTAATAAA
AATACGCAGT TTTTTTTGTC ACAAAAGCGA CTGCAAAAAT ATCAGCTGTT TGTGCAGCAT
GACATCAAAA ATTTAGCCCA ATTTATTCAA TTGTTAGCCG ATCAAGTTCG TGAGGCCGAA
TCAGAAGATG ATAAAAAATT GCTGGTTGAT CATCTTAAAA AGGTGTTGCC TATCGTGACA
GAGCGTGCTG AAAAAACCAT CAAGCAGATG ACACTTTCCA GCGGGTCCTT TCAAAGTGTC
GAACCGATTG AGTTTGCCAA TGAAATTGCA CGCATTGCAC AGGGGTTAGG TATTAAATAT
CAGTTGCACG GCGTATATTG TTGCTCCATG TCTTATACCT TGTTTGAGCA GGTGATTCAA
AATGTGCTGG AAAACTTTCA ACACCATGCT TATGGTAAGC CTCTTTTGAT TGATGTGATG
CCAGATGGGC ACGTTATTTT TTCAATAGCG CACCAAGCAG GCCAAGATGA TATTCAAAGT
GAGCGATTGT TTGAACCCTT TTGGTCCAGC TCAGAAGAAG GGATGGGGTT AGGCTTGTTT
ATTACTCGTG AGTTGTTATC TACGGTGGGG GGTGCTATTT ACTTTGAAGC GTTAGAGCAT
CAAAATCGAT TTGTGGTTCA ATTTTGTGCT CAGCTTAGTC CTGAATAA
 
Protein sequence
MISEWAGELA FSAILIGLTL ILVVWYLHAQ SRRLKKAILE LYEANRAVNQ DALDFVDQAW 
PILNAAGFKG MKGQITWFGE VKQIEKGKEA ALSYPVNLAE GGMDFQLLVA APRLRGEKKL
FAQLIFQTFK SLLVLDVSNK NTQFFLSQKR LQKYQLFVQH DIKNLAQFIQ LLADQVREAE
SEDDKKLLVD HLKKVLPIVT ERAEKTIKQM TLSSGSFQSV EPIEFANEIA RIAQGLGIKY
QLHGVYCCSM SYTLFEQVIQ NVLENFQHHA YGKPLLIDVM PDGHVIFSIA HQAGQDDIQS
ERLFEPFWSS SEEGMGLGLF ITRELLSTVG GAIYFEALEH QNRFVVQFCA QLSPE