Gene Tcr_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0466 
Symbol 
ID3761567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp523015 
End bp523731 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID637785177 
Producthypothetical protein 
Protein accessionYP_390736 
Protein GI78484811 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0000000941633 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CATTTTCTGT TAAATCGTTA TTAGTTTCTA TGGCTATCGC TTCTTCTGCT 
GCCTTATCGG TTGCGCCTGC CACAACGCAA GCGGGTGTGT CTGGTAATAT GGGGGCGGTC 
TCTACTTATG TGTTCCGTGG TTTGTATCAA ACCGGTGCTG CAGGTCAAGG TGGGATTGAT 
TATGAATCTG ATTCAGGGTT TTATGCCGGA ACATGGTTGT CTCAGGTAGG TACTGGAAAT 
GCCAGTCAGC AAGGTCTTGA ATATGATCTT TATGGTGGAT GGGGTGGTTC TGCCGGTGGC 
GTTGATCTAG GCATTGGTTA TGCGGGTTAT TTTTACACCA ATGGGTTTGA CCGCATGTAT 
AACGAGTTAA ATCTGTCGGC AGGTTTCGGT GGCGTTACGA TCGCTTTCAA CCCAGGTATT 
TATGATAAGA AAGATGCAAA AGGTCATGCA GAAACCAATT ATTACAATGC CAACATCAGT 
GGTGATATTG GACCAATCTC TGCAACATTA GGGTACAACG ACTGGGATAC GTCAACAGGT 
GAAACAAAAG ATGGTGCCGT CAATACGTAT GTTGAATTGT CTTATTCTAA GGAGTTATTT 
AAAGGGGTGG ATGGTTCAAT CACTTATATG GGGAGTCAAG CTGAGGATGC AGCAGGTGAC 
AGTCATGTCC AGAACTACCT TGTGTTTGGT GTGACGTCTT CGTTCGACAT TATGTAA
 
Protein sequence
MKKTFSVKSL LVSMAIASSA ALSVAPATTQ AGVSGNMGAV STYVFRGLYQ TGAAGQGGID 
YESDSGFYAG TWLSQVGTGN ASQQGLEYDL YGGWGGSAGG VDLGIGYAGY FYTNGFDRMY 
NELNLSAGFG GVTIAFNPGI YDKKDAKGHA ETNYYNANIS GDIGPISATL GYNDWDTSTG 
ETKDGAVNTY VELSYSKELF KGVDGSITYM GSQAEDAAGD SHVQNYLVFG VTSSFDIM