Gene Tcr_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0452 
Symbol 
ID3761479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp506296 
End bp506949 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content43% 
IMG OID637785163 
Producthypothetical protein 
Protein accessionYP_390722 
Protein GI78484797 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATG CTTTTTCCAT GACGCCAGAC TTTATTGCCG GTCAAGCTGG TCGTCTTGAA 
ATCAGAATGA CCAGGCCTGG TCAAAATTTA ACGGCAAATT TACCTTCTGA CAGCCCTCAT 
AAGTGGGTGG TTCTTAGTCA TCCTCATCCA CAGTTTGGCG GCACAATGGA TAATAAAGTT 
GTCACCACGA TGGAAAAAAC ATTTCAAAGC TTAGGCTATG GCACTTTGGC TTATAACTTT 
CGGGGCGTGG GAAAGTCAGA AGGAAATTAT GATGGTGGGG AAGGTGAACA ACAGGATTTA 
TATGACGTTG TTTGTTGGCT GAGAGAAAAT GTTGGCTTGG CCGAACTTGT TTTGGCAGGA 
TTTTCTTTTG GAAGTTACAT TACGTTGAAA CAAGTCGATC GAATTCAGCC TACCGCCATT 
TGCACGGTGG CCCCCCCGGT TTCTATGTAT GACTTTTCAG GCATTCAGCC AATAATGCCT 
TGGTATTTAA TACAGGGTGG ACAGGATGAG GTGATTGATG CCAAAGAGGT ATTGGATTGG 
GCGATGCAAT TGAAAAAACA ACCGGATATT TTCTGGCGAG GTGAGGCGAG TCATTTTTTT 
CATCGACAGC TCATCTGGTT AAAAAAGATT TTGATAACGA CATTTGAAAA ATAA
 
Protein sequence
MTNAFSMTPD FIAGQAGRLE IRMTRPGQNL TANLPSDSPH KWVVLSHPHP QFGGTMDNKV 
VTTMEKTFQS LGYGTLAYNF RGVGKSEGNY DGGEGEQQDL YDVVCWLREN VGLAELVLAG 
FSFGSYITLK QVDRIQPTAI CTVAPPVSMY DFSGIQPIMP WYLIQGGQDE VIDAKEVLDW 
AMQLKKQPDI FWRGEASHFF HRQLIWLKKI LITTFEK