Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0418 |
Symbol | |
ID | 3761199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 468121 |
End bp | 468903 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785129 |
Product | hypothetical protein |
Protein accession | YP_390688 |
Protein GI | 78484763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000000826848 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC AATGGCATCA TTCAGCAATC CTATTCAGCG CCCTGTTATG GGGAACATCA GTCCATGCCG GTGAACAGCT ATTAGGGTAC ACAAAAGGAG CAGAACCCTT ACCTAAAGGC GCTTCAGAGT TCTATCAAAT TTTCACTCAA CGCAACGATA AAGGCCAAGG CACTTACCGA GCGCTCGACA GCAAAACAGA AATTGAACAT GGATTTACCC ATCGTTTTTC CGGTGCAATC GCCATTACCG GTCATCAAAT TGAAACAAAA GAGTTAATTA TTGGAGGGTA TCTACCGCAA GAAAAAAACA CCAGTTTTAC TTTTTCTGGA ATTGAAACCG AACTTAAGTA TGCATTTTTA ACACCCGCCC TCAATGACAT TGGCCTGTCA ACGACCGTTG GCCTGGATTT CGACACCGTA GACAAACATT CCGGACAAAA GAAAGACACC TTATCAATCG ATTTGGGGCT GCAACTTCAA AAATATTTCA TGGACGGACA ACTGGTTTGG TTGGGTAACA CCAATCTTGA ATCGACTTAT GCCAAGCGGG CTAAGATTAA CGGCATCAAT GATGAAGAAA CTTGGCCAAC ACAACCTGAA ATGGAAATTG AACTGGCCGC AAAAACCGGA CTGTCTTACC GCTTTGCATC AAACTGGTCG ATCGGGGCGG AAGCCTTATA CGAAACTGAG TTTGAAACAG AAGTGGGACA GGAAAGATGG TCTATCTTCG TAGGGCCTTC CATTCACTAT GGCCATAAAC ATTTTTGGGC AACCTTAACA TAA
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Protein sequence | MKKQWHHSAI LFSALLWGTS VHAGEQLLGY TKGAEPLPKG ASEFYQIFTQ RNDKGQGTYR ALDSKTEIEH GFTHRFSGAI AITGHQIETK ELIIGGYLPQ EKNTSFTFSG IETELKYAFL TPALNDIGLS TTVGLDFDTV DKHSGQKKDT LSIDLGLQLQ KYFMDGQLVW LGNTNLESTY AKRAKINGIN DEETWPTQPE MEIELAAKTG LSYRFASNWS IGAEALYETE FETEVGQERW SIFVGPSIHY GHKHFWATLT
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