Gene Tcr_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0418 
Symbol 
ID3761199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp468121 
End bp468903 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content44% 
IMG OID637785129 
Producthypothetical protein 
Protein accessionYP_390688 
Protein GI78484763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000826848 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AATGGCATCA TTCAGCAATC CTATTCAGCG CCCTGTTATG GGGAACATCA 
GTCCATGCCG GTGAACAGCT ATTAGGGTAC ACAAAAGGAG CAGAACCCTT ACCTAAAGGC
GCTTCAGAGT TCTATCAAAT TTTCACTCAA CGCAACGATA AAGGCCAAGG CACTTACCGA
GCGCTCGACA GCAAAACAGA AATTGAACAT GGATTTACCC ATCGTTTTTC CGGTGCAATC
GCCATTACCG GTCATCAAAT TGAAACAAAA GAGTTAATTA TTGGAGGGTA TCTACCGCAA
GAAAAAAACA CCAGTTTTAC TTTTTCTGGA ATTGAAACCG AACTTAAGTA TGCATTTTTA
ACACCCGCCC TCAATGACAT TGGCCTGTCA ACGACCGTTG GCCTGGATTT CGACACCGTA
GACAAACATT CCGGACAAAA GAAAGACACC TTATCAATCG ATTTGGGGCT GCAACTTCAA
AAATATTTCA TGGACGGACA ACTGGTTTGG TTGGGTAACA CCAATCTTGA ATCGACTTAT
GCCAAGCGGG CTAAGATTAA CGGCATCAAT GATGAAGAAA CTTGGCCAAC ACAACCTGAA
ATGGAAATTG AACTGGCCGC AAAAACCGGA CTGTCTTACC GCTTTGCATC AAACTGGTCG
ATCGGGGCGG AAGCCTTATA CGAAACTGAG TTTGAAACAG AAGTGGGACA GGAAAGATGG
TCTATCTTCG TAGGGCCTTC CATTCACTAT GGCCATAAAC ATTTTTGGGC AACCTTAACA
TAA
 
Protein sequence
MKKQWHHSAI LFSALLWGTS VHAGEQLLGY TKGAEPLPKG ASEFYQIFTQ RNDKGQGTYR 
ALDSKTEIEH GFTHRFSGAI AITGHQIETK ELIIGGYLPQ EKNTSFTFSG IETELKYAFL
TPALNDIGLS TTVGLDFDTV DKHSGQKKDT LSIDLGLQLQ KYFMDGQLVW LGNTNLESTY
AKRAKINGIN DEETWPTQPE MEIELAAKTG LSYRFASNWS IGAEALYETE FETEVGQERW
SIFVGPSIHY GHKHFWATLT