| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0414 |
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| Symbol | |
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| ID | 3761195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 463471 |
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| End bp | 466035 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637785125 |
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| Product | AAA ATPase |
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| Protein accession | YP_390684 |
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| Protein GI | 78484759 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.817995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATA AGTTTACCTC TCAGTTTCAG TCCGCCTTGG GTCAAGCGCA ATCGATCGCG
CTAGGTTTGG GAAATCAATT TATTGAACCG TTGCATATTT TATCTGCGCT ACTGGCCGAA
CAAACGTCTT TGTTGCAATT GGCGGGGGTC AATGTCGCCC AGTTAAAGCA AAGTGTGGAT
GAGAAATTAC AAACCTTACC AAAAGTCTCT GGTGCCGCTG GCGATGTTCA GTTGTCGCAA
AGCGGTGGGC GCGTATTAAA TTTAATGGAT CAAATTGCTC AGAAAAAAGG GGATGCGTAC
ATTGCCAGCG AACTCTTTTA TCTGGCGGCA TTACAATCGG GCGACCCTGT TAAAGAGCTC
TTAAAGAAAG CAGGGGCAAC CGAACAAACG ATTGAATCAG CCATCGAACA AGTCAGAGGG
GGCGAAAGCG TGCAAGATCA AAATGCAGAA GAAAACAGAC AAGCGCTGGA TAAATATACA
TTGGATTTAA CCGAACGTGC TCGGAGCGGG AAATTGGACC CTGTGATTGG CCGAGACGAT
GAAATTCGTC GAGCGGTGCA GGTGTTACAG CGTCGAACGA AAAACAATCC GGTTTTAATC
GGGGAGCCAG GGGTTGGGAA AACCGCCATT GTTGAAGGGT TGGCGCAACG TATTGTGAAT
GGCGAAGTGC CGGAAGGTTT GAAAAACAAA CGCCTTTTAT CCTTAGATTT GGCAGGACTC
TTGGCCGGAG CAAAATACCG TGGTGAATTT GAGGAGCGTT TGAAAGCCTT ATTAAAAGAT
TTAGAAAAAC AAGAAGGGTC CGTTATCTTG TTTATCGATG AAATTCACAC CATGGTTGGG
GCCGGTAAAA CCGAAGGCTC GATGGATGCT GGAAACATGC TGAAACCGGC CTTGGCACGA
GGAGAACTTC ATTGTATTGG TGCGACAACG TTGGACGAGT ATCGCGAAAA CATTGAAAAA
GACGCGGCCT TGGAACGTCG TTTCCAAAAA GTCATTGTGG ATGAACCATC GGAAGAAGAC
ACCATTGCGA TTTTACGTGG ATTGAAAGAG CGCTATGAAG TGCATCATGG GGTCGCGATT
ACCGATCCGG CCATTATTGC AGCCGCGCAT TTATCGCAAC GCTATATCAC GGATCGTCAG
TTACCGGATA AAGCGATTGA TTTGATCGAT GAAGCGGCTT CACGTATTCG AATGGAAATT
GACTCCAAAC CGGAAGAAAT GGACCGTTTG GATCGACGCT TGATTCAGTT GAAAATCGAG
CGTGAGGCGT TGAAAAAAGA AAAAGATGAA GCGTCGAAAA AACGTTTAGG CGTGTTGCAA
GAATCGATTG ATGAAATGGA GAAAGAGTAC GCCGACTTAG AAGAAATCTG GAAAAAAGAT
AAAGCCGCAT TGCAAGGCGC GAAACAGTAT AAAGAAGAAC TGGATAAAGC CCGTATTGAA
ATGGAAGCTG CGCACCGTGA AGGGAATTTA GGCAAAATGT CTGAGCTTCA GTATGGAGTG
ATTCCGGATT TGGAAGCCAA AATCAAAGCC GCAGAAGAGG CCGAAGGGGA AGAAGACGGT
CAAATGCATC TGTTACGTAA TAAAGTCACG GAGGAAGAAA TCGCCGAAGT GGTGGCACGC
TGGACCGGGA TTCCAATTTC CAGAATGCTG GAAGGCGAGC GTGATAAATT GTTGCGCATG
GAAGAAGCGA TTGGCGCGAA AGTGATTGGA CAAAGCGAAG CGGTTTCAGC CGTTTCCGAT
GCCATTCGCC GCTCTCGTGC CGGTTTGTCC GATCCAAATC GTCCGAATGG ATCTTTCTTA
TTCTTAGGGC CAACAGGGGT CGGGAAAACC GAGTTGACTA AAGCCTTGGC GGATTTCCTG
TTCGACACGC AAGATGCCAT TGTACGTTTG GATATGTCTG AATTTATGGA AAAACACTCA
GTGGCTCGTT TGATTGGTGC GCCTCCCGGG TATGTCGGTT ATGAACAAGG TGGGTATTTA
ACGGAAGCGG TTCGCCGTAA ACCCTATTCG GTGATTTTGC TGGATGAGGT GGAAAAAGCC
CATCCGGATG TCTTTAATAT CTTGCTACAA GTTTTAGATG ACGGGCGATT AACCGATGGA
CAAGGGCGCA CGGTGGACTT TAAGAATACC GTAATCGTGA TGACGTCGAA TTTGGGGTCA
CAAATCATTC AAGAAAAAAC AGGTCAAGCG ACCTATGAGG AAATGAAGCG TGATGTGATG
GATGTGGTCG GAAGTCATTT CCGCCCAGAA TTCATTAACC GAATTGACGA TATTGTGGTG
TTCCATCCAT TGGATAAAGC ACAGATTCGT TCGATTGCCG ACATTCAGTT GAATCATTTA
CGTCAGCGTT TAGCGGACAA TGAATTGAGT CTGGAGTTAT CCGACGCCGT GTTGGATAAA
ATCGCTGAAG CTGGGTTTGA TCCCGTCTAT GGCGCCCGCC CTTTAAAACG CTCGGTGCAG
CAAATGGTTG AAAACCCATT GGCGCAACGT TTGTTAAAAG GCGAGTTTGT CGCGGGTGAT
ACCGTTCATG TTGGTTTGAC AGACGGTGAA ATTGATTTTC ATTAA
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| Protein sequence | MMDKFTSQFQ SALGQAQSIA LGLGNQFIEP LHILSALLAE QTSLLQLAGV NVAQLKQSVD
EKLQTLPKVS GAAGDVQLSQ SGGRVLNLMD QIAQKKGDAY IASELFYLAA LQSGDPVKEL
LKKAGATEQT IESAIEQVRG GESVQDQNAE ENRQALDKYT LDLTERARSG KLDPVIGRDD
EIRRAVQVLQ RRTKNNPVLI GEPGVGKTAI VEGLAQRIVN GEVPEGLKNK RLLSLDLAGL
LAGAKYRGEF EERLKALLKD LEKQEGSVIL FIDEIHTMVG AGKTEGSMDA GNMLKPALAR
GELHCIGATT LDEYRENIEK DAALERRFQK VIVDEPSEED TIAILRGLKE RYEVHHGVAI
TDPAIIAAAH LSQRYITDRQ LPDKAIDLID EAASRIRMEI DSKPEEMDRL DRRLIQLKIE
REALKKEKDE ASKKRLGVLQ ESIDEMEKEY ADLEEIWKKD KAALQGAKQY KEELDKARIE
MEAAHREGNL GKMSELQYGV IPDLEAKIKA AEEAEGEEDG QMHLLRNKVT EEEIAEVVAR
WTGIPISRML EGERDKLLRM EEAIGAKVIG QSEAVSAVSD AIRRSRAGLS DPNRPNGSFL
FLGPTGVGKT ELTKALADFL FDTQDAIVRL DMSEFMEKHS VARLIGAPPG YVGYEQGGYL
TEAVRRKPYS VILLDEVEKA HPDVFNILLQ VLDDGRLTDG QGRTVDFKNT VIVMTSNLGS
QIIQEKTGQA TYEEMKRDVM DVVGSHFRPE FINRIDDIVV FHPLDKAQIR SIADIQLNHL
RQRLADNELS LELSDAVLDK IAEAGFDPVY GARPLKRSVQ QMVENPLAQR LLKGEFVAGD
TVHVGLTDGE IDFH
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