| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0404 |
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| Symbol | hslU |
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| ID | 3761185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 454836 |
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| End bp | 456158 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637785115 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_390674 |
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| Protein GI | 78484749 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0953822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACAC CCAAGGAAAT TGTTCACGAA TTGGATAGCT ATATCGTTGG TCAGGCAGAA
GCGAAAAAAT CCGTTGCCAT TGCTTTACGT AACCGCTGGC GCAGAATGCA GCTGCCTGAA
GAGCTCCGTC AGGAAGTCAC GCCGAAAAAT ATTCTGATGA TTGGGCCGAC AGGGGTTGGG
AAAACCGAAA TTGCGCGCCG TTTGGCCAAA CTAGCCAATG CCCCTTTCAT TAAAGTCGAA
GCGACCAAGT ACACAGAGGT GGGCTACGTC GGTCGAGAAG TGGACTCGAT TATTAAAGAT
TTAGTGGAAA ACGCCATCAA AATGCAACGC GAACAAGCGA TGAAAGGCGT CAAAAACAAA
GCGCAAGATC TTGCGGAAGA GAAAATTCTC GATATTTTAT TACCGCCCGC TCGCGGCCGT
GAAGAAGACA GCTATGAACA CATGTCTGAA ACGCGTCAAA AATTCCGTAA ACGCCTGCGT
GAAGGGGAAT TAGACGACAA AGAAATCGAA ATTGACTTGA ACGCGGCACC GCCCCATGTG
GAAATCATGG GCGCGCCAGG CATGGAAGAA ATGACCAACC AGCTGCAAGA CATGTTTCAA
GGCTTGAGCC AAGGAAAGAA GAACAAACGT AAACTGCCGA TCAAGCAAGC GATGAAGTTA
CTCACCGAAG AGGAAGCGCA ACGCATCATT GATCAGGAAG ACTTGAAAAC CAAAGCGATT
GAAAATGTTG AGCAGAACGG AATCGTCTTC ATTGATGAAA TCGACAAAGT GGCCAAACGT
CAGGAAGGTG CTGGCGGCGG CGACGTCTCT CGTGAAGGGG TTCAACGTGA CCTGCTGCCA
TTGATTGAAG GGTCGACCGT GTCCACTAAA TATGGCATGA TCAAAACCGA TCACATTCTG
TTTGTGGCCT CCGGCGCATT CCATTTAGCC AAACCATCGG ACTTGATTCC TGAGTTACAA
GGGCGTTTAC CGATTCGCGT GGAGCTGAAG TCTTTAAAAG TGGAAGACTT TATCCGCATC
TTGACCGAAC CCAAGGCGGC GTTAATTACG CAAGCGATTG AGTTGTTGAA AACCGAAGGC
GTCAAGATTG AATTTACTGG CGAAGGCATC AAACGATTGG CAGAAATTGC TTATCACGTG
AATGAAACCA CCGAAAACAT CGGTGCAAGA CGCTTGCACA CGGTCATGGA ACATTTGCTG
GAAGAAGTGT CTTTCAATGC TCCGGATTTC GGTCAAGAAA CCGTCATCAT CGATGAAGCA
TTTGTGAATG ATCGCTTGGG CGAACTGTCG CAAGACCAAG ATCTCTCACA ATACATTTTG
TAA
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| Protein sequence | MMTPKEIVHE LDSYIVGQAE AKKSVAIALR NRWRRMQLPE ELRQEVTPKN ILMIGPTGVG
KTEIARRLAK LANAPFIKVE ATKYTEVGYV GREVDSIIKD LVENAIKMQR EQAMKGVKNK
AQDLAEEKIL DILLPPARGR EEDSYEHMSE TRQKFRKRLR EGELDDKEIE IDLNAAPPHV
EIMGAPGMEE MTNQLQDMFQ GLSQGKKNKR KLPIKQAMKL LTEEEAQRII DQEDLKTKAI
ENVEQNGIVF IDEIDKVAKR QEGAGGGDVS REGVQRDLLP LIEGSTVSTK YGMIKTDHIL
FVASGAFHLA KPSDLIPELQ GRLPIRVELK SLKVEDFIRI LTEPKAALIT QAIELLKTEG
VKIEFTGEGI KRLAEIAYHV NETTENIGAR RLHTVMEHLL EEVSFNAPDF GQETVIIDEA
FVNDRLGELS QDQDLSQYIL
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