Gene Tcr_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0400 
Symbol 
ID3760917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp451311 
End bp452951 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content47% 
IMG OID637785111 
Product2-polyprenylphenol 6-hydroxylase 
Protein accessionYP_390670 
Protein GI78484745 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA TTAGTAAATC TTTTCGACAA CTGACTCGCA TCATTAAAAT CAACCGCGTC 
CTGACCCATT ATCAAATCGA CAAACTGGTC TTAAGTGACA CCAAATATGC GTGGTTGATT
GTCGCCAACC TGCTGTTGCC ATGGAACTGG CGCTTTCAAT CCAAAGGCAA CCGTGGTGAA
CGCATTCGGC TGGCTTTGGA AGAACTTGGC CCAATCTTCA TCAAACTGGG ACAGGCGCTT
TCCACCCGAA AAGATTTGCT GCCGGAAGAC ATCTCGGTTG AATTACGAAA ACTGCAAGAC
GATTGTCCAC CGTTTGACGA GCAACATTCC ATCAGCATCA TTGAAAAAGG TTTGAAACGC
CCTATTGAAG AAGCCTATGC CAGCTTTGAC CCGACGCCGA TGGCTTCGGC GTCCATTGCA
CAAGTGCATG CCGCCACCTT ATACGACGGC TCTGAAGTGG TTGTCAAAGT GGTTCGACCC
GACATCAAAC CAGTGATTGA ACAAGACGTT TCCATCATGA AATCTCTAGC GCAGTTATTG
GAAGCGGCGG TGAAAGAATC GAAACGCCTG CACCCGACCG AAGTGGTGGA AGAGTTTGAA
AAAACCATTC TAGATGAGCT GGATATGATG CGAGAAGCGT CCAATGCCTC GCAATTGCGT
CGTAACTTTG AACATTCCGA TTTGCTGTAT GTACCCGACA TTTACTGGTC CCACACCAAT
GATAATGTGA TGACGATGGA ACGTATTTAC GGCATCCGTA TTTCTGAAAT CGATAAATTA
AAAGCCGCTA ACATTGATTT AACGGATCTT TCGGCAAAAG GCGTGACCAT CTTTTTCACC
CAGGTGTTCA AACACAATTT CTTCCATGCC GACATGCACC CGGGCAACAT TTTTGTGTTG
CCGGATGGAC GTTATGCCGC CATTGATTTC GGCATTATGG GCACCCTCAA CCCAGAAGAC
CAGCGTTATT TGGCAGAAAA CTTCCTGGCC TTTTTCAATC GTGATTATTT ACGTGTGTCC
GAACTCCACA TTGAATCCGG CTGGGTGCCG GCCGATACCC GAGTCAACGA ATTGGAATCG
GCCATTCGCT CCGTCTGCGA ACCGATTTGG GATCGTCCGT TAAAAGAAAT TTCATTCGGT
TTGTTCCTGA TGCGCCTATT CCAAACCGCA CGTCGTTTCG GCATGGAAGT ACAACCGCAG
TTGGTGTTGC TGCAAAAAAC GCTACTCAAC ATTGAAGGGC TTGGACGCCA ACTGGATGAC
GAACTTGATT TATGGGATAC CGCCAAACCC TTTTTGGAAG ATTGGATGCA AGAGCGTGTG
GGGCTAAAAA GCCTGGTTAA AAACACCAAA GCCAATCTGC CCTTCTGGAT TGAGCAGGCA
CCAAGCTTAC CGGGCTTATT GCACAGCAGC TTGCAAAAGC TGTCGCATGC CAATTTCGAT
CAGCAATCTG AACAAATTGC CCGTCTGGAA CAACAGCTCG CCAAACAACA AAAAGCGGAT
CGCAATCGCG CCATCGCGGT GTTGTTGTTT GTTGTGGCCG CCATTCCAGA GCTCACGCAT
GTGCCTTATT TGATGCAACA GATATGGTTA CAAGGGCTTA TTGCACTGTT AGGGCTTTAT
TTCCTTTTTA AAAAACCATA A
 
Protein sequence
MNIISKSFRQ LTRIIKINRV LTHYQIDKLV LSDTKYAWLI VANLLLPWNW RFQSKGNRGE 
RIRLALEELG PIFIKLGQAL STRKDLLPED ISVELRKLQD DCPPFDEQHS ISIIEKGLKR
PIEEAYASFD PTPMASASIA QVHAATLYDG SEVVVKVVRP DIKPVIEQDV SIMKSLAQLL
EAAVKESKRL HPTEVVEEFE KTILDELDMM REASNASQLR RNFEHSDLLY VPDIYWSHTN
DNVMTMERIY GIRISEIDKL KAANIDLTDL SAKGVTIFFT QVFKHNFFHA DMHPGNIFVL
PDGRYAAIDF GIMGTLNPED QRYLAENFLA FFNRDYLRVS ELHIESGWVP ADTRVNELES
AIRSVCEPIW DRPLKEISFG LFLMRLFQTA RRFGMEVQPQ LVLLQKTLLN IEGLGRQLDD
ELDLWDTAKP FLEDWMQERV GLKSLVKNTK ANLPFWIEQA PSLPGLLHSS LQKLSHANFD
QQSEQIARLE QQLAKQQKAD RNRAIAVLLF VVAAIPELTH VPYLMQQIWL QGLIALLGLY
FLFKKP