| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0393 |
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| Symbol | |
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| ID | 3760909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 444278 |
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| End bp | 444859 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785103 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_390663 |
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| Protein GI | 78484738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000102874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG TATGGACTGC AGAACTTCGT ACTGAAGAAG GGAAAGGTGC GAGCCGCCGC
CTTCGTCATG CGGGGAAAGT ACCTGCGATC ATCTATGGTG GTGACGTAGA CGCAAAATCA
ATCGCATTGA AAAGCAACCA AATCGAACGT GCACTTAAAT TAGACGTTGA TTTGTATAAC
TCTGTTTTGA CACTGGAAGG TGCTGGCGAT GCTGAAAACT GCATCATCAA AGACCTTCAG
CGTCATCCTG CAACTGGTTT TATCACGCAC ATCGATTTTC AACGTGCTTC TGATAAAGCA
ATGGTTACTA AGCGTGTACC GCTTAAGTTC AAAGGCAAGG AATCTTCACC AGGTGTTAAA
ATGGGTGGCT TGATGTCATT CATGCAAACA ACAGTTGAAG TTAGCTGTTT AGCGAAAGAC
TTACCGACAG CAATCGATGT AGACGTTTCT GAACTAGAAG CGGGTACAAA CCTACGTTTG
TCTCAGTTGA CGTTGCCTAA AGGTGTTAAG CTAACCGCTC TAACACACGG TAACACTGAC
TACGACCAAG CGGTTGTTGG TATCAGTAAA GTTAAACGTT AA
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| Protein sequence | MSQVWTAELR TEEGKGASRR LRHAGKVPAI IYGGDVDAKS IALKSNQIER ALKLDVDLYN
SVLTLEGAGD AENCIIKDLQ RHPATGFITH IDFQRASDKA MVTKRVPLKF KGKESSPGVK
MGGLMSFMQT TVEVSCLAKD LPTAIDVDVS ELEAGTNLRL SQLTLPKGVK LTALTHGNTD
YDQAVVGISK VKR
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