Gene Tcr_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0392 
Symbol 
ID3760908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp443058 
End bp444023 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID637785102 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_390662 
Protein GI78484737 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000000191393 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACA AAAATGTCCG ATTATTTGCC GGAAACGCAA ATGTCAGCCT GGCTGAAAGT 
ATCTCCTCTT CAATCGAAAT CCCTCTTGGT AAAGCCGATG TTGGTCGCTT TAGTGATGGC 
GAGATTATGG TTCAGATTAA TGAATCCGTC CGAGGAAAAG ATGTCTATGT TTTGCAACCG 
ACATGTACCC CTGAACCCGC CGTTAATTTA ATGGAATTAT TGGTTATGAT CGACGCGTTA 
AAGCGTGCAT CAGCCAAACG CATTACGGCG GTTGTCCCTT ATTATGGGTT TGCGCGTCAA 
GATCGTCGTC CGCATTCCGC CCGTGTACCG ATTACCGCAC GTTTAGCGGC GGATATGATT 
ACCGTGGCCG GTGCCGACCG TGTGATTACG GTTGATTTGC ATGCTGATCA GATCCAAGGG 
TTCTTTGATA TTCCGGTTGA CAATATTTAT GGCTCGCCAA CGCTTGTAGC CGATATGCGC 
GCTTCAGGGC ATATTGCTGA AGACAACATG ATGGTGGTCT CACCTGATAT GGGTGGTGTG 
GTTCGTGCGC GTGCCGTGGC GAAAGCGCTT GGCTGTGAAA TGGCGATTAT CGATAAGCGT 
CGTCCGAAAG CGAATGTTGC TCAAATTATG AACATCATCG GTGATGTGTC CGGGCGTGAC 
TGTATTTTGG TCGACGACAT GGTTGATACG GCCGGAACGC TTTGCAAAGC AGCAGAAGCT 
TTGAAAGAAC ACGGCGCTAA CAGTGTCACC GCTTATGTTG TACACGCCGT TTTGTCCGGC 
CCAGCGGTCG ATAACATTAA CAAATCCTGC TTAACCGAAT TGGTGGTGAC GGATACGATT 
CCATTATCAG AAGCGGGCTT AGCCTCTGAA AAAATTCGTC GTGTTTCTGT TGCCTCTGTT 
CTGGGTGAAA CGATTCGACG CGTTCACCAG GAAGAGTCGG TTTCCGAGTT GATGCCGATT 
CGTTAA
 
Protein sequence
MAYKNVRLFA GNANVSLAES ISSSIEIPLG KADVGRFSDG EIMVQINESV RGKDVYVLQP 
TCTPEPAVNL MELLVMIDAL KRASAKRITA VVPYYGFARQ DRRPHSARVP ITARLAADMI 
TVAGADRVIT VDLHADQIQG FFDIPVDNIY GSPTLVADMR ASGHIAEDNM MVVSPDMGGV 
VRARAVAKAL GCEMAIIDKR RPKANVAQIM NIIGDVSGRD CILVDDMVDT AGTLCKAAEA 
LKEHGANSVT AYVVHAVLSG PAVDNINKSC LTELVVTDTI PLSEAGLASE KIRRVSVASV 
LGETIRRVHQ EESVSELMPI R