| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0340 |
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| Symbol | |
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| ID | 3762365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 389179 |
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| End bp | 390144 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785049 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_390610 |
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| Protein GI | 78484685 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000104163 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCTTT CACAGATTCG AAAACTTATT CAGGATGACA TTGAGGCGAC TGACCAATTG
ATTCTGTCTA AACTGTCTTC CGATGTTGTT CTTATTAATC AAATTGGCCA CTACATTATC
AACAGTGGTG GAAAGCGTTT ACGCCCTTTA CTGGTCTTAT TGTCCGCTCA CGCCTGTGAC
TACAAAGGAA AAGACCACTT AACGTTGGCG GCCGTGATTG AATTCATTCA CACATCCACC
TTACTACATG ACGATGTCGT CGATGAATCA GAAACTCGAC GCGGCAATCA GACGGCCAAT
GAAGTCTGGG GAAATGCCGC CAGTGTACTG GTCGGTGATT TCTTATACTC ACGCTCATTC
GAAATGATGG TGGAACCTGG AATTATGCGC GTCATGGAAG TGATGTCTGA AACCACGAAT
GTGATTGCAG AAGGTGAAGT CCTCCAATTA CTCAACTGCC ATGACGCCGA CACCACGAGT
CAGCGCTACA TGGAAGTCAT TCACCGAAAA ACCGCCAAAC TGTTTGAAGC CGCCACTTTA
TTAGGGCCTA TCCTGGGTAA AAAACCCGAA CTAGAATCGG CTTTTTCATC CTATGGTCGC
CACCTTGGTG CCGCCTTCCA ACTCATCGAT GATGCACTAG ATTACACGGC CGATGCCGAT
GAACTTGGTA AAAACCTAGG AGACGATCTG GCCGAAGGGA AACCTACTCT GCCTTTAATC
TATGTACTTG AAAATGGAAC CGAAAACGAA AAGTCATTGA TTCGTAAAGC CATTGAAACC
GAAGGCATTA AATTATTGAA AGAAGTCACT TCCATCATTC AAACATCCGG TGCCATTCAA
TACACTCAAG AAGTTGCGAC GCAAGAAGCT GAAAAAGCTA AAGCCGCTCT CGCTCCGCTG
AACGATTCTG AGATTAAACA AGCGTTATTA TCTTTGGCAG ACTTAGCGGT TCAAAGAAAC
CACTAA
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| Protein sequence | MTLSQIRKLI QDDIEATDQL ILSKLSSDVV LINQIGHYII NSGGKRLRPL LVLLSAHACD
YKGKDHLTLA AVIEFIHTST LLHDDVVDES ETRRGNQTAN EVWGNAASVL VGDFLYSRSF
EMMVEPGIMR VMEVMSETTN VIAEGEVLQL LNCHDADTTS QRYMEVIHRK TAKLFEAATL
LGPILGKKPE LESAFSSYGR HLGAAFQLID DALDYTADAD ELGKNLGDDL AEGKPTLPLI
YVLENGTENE KSLIRKAIET EGIKLLKEVT SIIQTSGAIQ YTQEVATQEA EKAKAALAPL
NDSEIKQALL SLADLAVQRN H
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