Gene Tcr_0327 details

Gene Information

• Locus tag: Tcr_0327
• ID: 3762549
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 367560
• End bp: 368165
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637785036
• Product: single-strand binding protein
• Protein accession: YP_390597
• Protein GI: 78484672
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.00747942
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGTG GTGTCAATAA AGTGATTTTG GTTGGAACGC TGGGAAGAGA TCCTGAGATT 
AAGTATGCAG CAAATGGTAA TGCCATTGCG AATTTGAATG TTGCGACTTC AGAACAGTGG 
AATGATAAGG CGTCTGGTCA AAAGCAAGAA AAAACAGAGT GGCATCGCGT CGTTATCTTT 
GGCAAGCTAG CTGAAATTGC AGGCCAATAT CTAACTAAAG GCTCTCAAGT ATACCTGGAA 
GGGAAGTTGC AGACGCGTAA GTGGCAAGAC CAAAACACCG GGCAAGATCG TTATTCCACG 
GAAGTGGTTA TCGACTTTAA TGGACAGATG CAAATGCTAG GCGGTGGAAA TCGTCAAGGA 
TCTGATGCAC CGTTTGATAA TAATGCTTCA GGGTTTGGTC AGCAAGCGCC GCAAGCACCA 
CAGCAAAATA ATATGGGCAT GAATAATCAG CCTCAGCAAA CGCAACCTGG TTTTGGTCAA 
ACGGCACCGC AACAGCAAGC GGCGCCTCAG CAAGGATTTG GTGGGCAGCC AAATAATCCG 
GCTCCGGCAC AACAAGTGCC TGCTTATACC GCAAATGACT TTGATGACGA TGATGTGCCA 
TTTTAG 

 

Protein sequence

MARGVNKVIL VGTLGRDPEI KYAANGNAIA NLNVATSEQW NDKASGQKQE KTEWHRVVIF 
GKLAEIAGQY LTKGSQVYLE GKLQTRKWQD QNTGQDRYST EVVIDFNGQM QMLGGGNRQG 
SDAPFDNNAS GFGQQAPQAP QQNNMGMNNQ PQQTQPGFGQ TAPQQQAAPQ QGFGGQPNNP 
APAQQVPAYT ANDFDDDDVP F