Gene Tcr_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0319 
Symbol 
ID3762541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp358504 
End bp359493 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content38% 
IMG OID637785028 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_390589 
Protein GI78484664 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGA TGTTAGAGCA GCTACTAACT CCACGTTTAG TAGATATTAA AACGGTTAAC 
GGTTTTAATA GCCGTGTAAC TCTTGAGCCT CTAGAGCGTG GTTTTGGGCA TACTCTAGGG 
AATGCTTTGA GAAGAATCTT ATTATCTTCC ATGCCGGGTG CTGCGATTGT TGAAGCACAA 
ATAGATGGTG TATTACACGA ATATTCAGCG ATTGAGGGTG TTCGTGAAGA TGTTTTAGAA 
ATCATGCTTA ATTTAAAGGA AGTTGCCATT AAATTAAATG AAACTTCTGA AGCTGAACTT 
ACATTGTCTA AAAAGGGTCC TGCAGTTGTT ACTGCGGCAG ATATTCAGTT GAACCATGAT 
ACTGAAATCA TGAACCCAGA TCTTGTTATC GCTCACCTTG GTGAGGGTGC TGAACTTTCA 
ATGAAGCTAA AGGTCGAAAA AGGGATTGGT TACAGAGCAG CTGTACAATC TTCTGATTCT 
GAATCGGCTA ACATCGGTGT TTTAAAGTTG GATGCAAGTT TCAGTCCAGT TAAAACAGTG 
AGTTATGAAG TTCAAAATGC TCGTGTAGAG CAAAGAACGG ATTTAGATAA GTTGATATTG 
AATGTCGTCA CTGATGGAAC GTTAGATCCT GAAGATGCGA TTAAACAAGC TGCAACAGTA 
CTGCATTATC AATTGATTGC TTTTGTTGAT TTAAAGCATA AAGAAATTGT TGTTCAAGAA 
GAAGAAGAAA ATGAATTTGA TCCGATCTTC TTGCAGCCAG TTGATGATTT AGAATTGACA 
GTACGTTCAG CTAACTGTTT AAAAGCAGAG CAAATCTATT ACATTGGTGA TTTAGTTCAA 
AGAGCTGAAT CAAGCTTGTT AAAGACGCCA AACCTAGGTA AAAAATCATT GCAGGAAATC 
AAAGATGTTC TTGCACAAAG AGGTTTAGGT TTAGGAACAA AACTCGAAAA CTGGCCACCT 
TCAAGTTTGG TTAGTAAAGA GTCAGCATAA
 
Protein sequence
MQEMLEQLLT PRLVDIKTVN GFNSRVTLEP LERGFGHTLG NALRRILLSS MPGAAIVEAQ 
IDGVLHEYSA IEGVREDVLE IMLNLKEVAI KLNETSEAEL TLSKKGPAVV TAADIQLNHD 
TEIMNPDLVI AHLGEGAELS MKLKVEKGIG YRAAVQSSDS ESANIGVLKL DASFSPVKTV 
SYEVQNARVE QRTDLDKLIL NVVTDGTLDP EDAIKQAATV LHYQLIAFVD LKHKEIVVQE 
EEENEFDPIF LQPVDDLELT VRSANCLKAE QIYYIGDLVQ RAESSLLKTP NLGKKSLQEI 
KDVLAQRGLG LGTKLENWPP SSLVSKESA