Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0315 |
Symbol | secY |
ID | 3762537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 355662 |
End bp | 356975 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637785024 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_390585 |
Protein GI | 78484660 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0598799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTC AGTCAATTGA AAATTCAGGC ACAGGTGGGT TAAGCCAAAA AATATTTTTT GTCTTAGGTG CGTTAATTGT TTACCGTTTA GGAACTCATA TTCCTGTTCC TTTGATTGAC CCAGTTGCGC TGGCTGCTAT GTTTGAACAG CAAAAGGGTA CGATCCTGGA CATGTTCAAC ATGTTCTCCG GTGGTGCTCT TCAAAGACTT TCTATTTTGG CGCTGGGGAT TATGCCGTAT ATTTCTGCCT CTATCATTAT GCAGTTATTA ACGGTTGTAT CTCCAACCCT TGAGCAGTTA AAGAAAGACG GTGAAGCTGG TCGAAGAAAA ATTACTCAAT ACACACGTTA TGGAACTGTT GTTCTTGCAA CATTTCAGGC ATTAGGCGTG GCAATTGCAC TAGAATCCCA GAACATTAAT GGGATGTCTG TCGTTGTTGA GCCAGGTTTG TTGTTTAAGG TTATTGCTGT CGCCACCTTG GTGAGCGGAA CAATTTTCTT AATGTGGTTA GGTGAGCAGA TCACCGAAAG AGGTATTGGA AACGGTATTT CTTTAATTAT TTTTGCAGGT ATTGTAGCAG GTTTACCTTC TGCACTTGGC GGCACGTTTG AGCAAGTCAA TACTGGCGCG ATGCATGCGA TAACTGCTTT TGTGTTATTG GCATTGGTGT TTTTGGTTAT TGCGTTCGTT GTCTTTGTTG AAAGAGGCCA ACGTCGTATT CCAATTCACT ACGCTCAACG CATGCGTGGT CGTAAGTTGT ATGGCGGTCA AGAAGGCCAT TTGCCATTGA AGTTGAATAT GGCGGGTGTT ATTCCTCCTA TTTTCGCTTC AAGCATTATT CTATTCCCAG CAACACTTGG TGGATGGTTT GGTACTGCAG AAAATATGGG ATGGCTTAAA GACATTGCAA CAACAATGTC GCCGGGTCAG CCTTTGTATA TTTTGTTTTA TGCAATGGCG ATTATTTTCT TTTGTTTTTT CTATACAGCA ATTGTTTTCA ATCCAAATGA GACAGCTGAT AACTTAAGAA AATCTGGTGC TTATATTCCA GGTATTCGCC CTGGTCAGCA AACAGCAAGA AGAATTGATA CAATCATGAG TCGTTTAACA TTGGCAGGTG CAATTTATAT TACACTTGTT TGTTTGTTAC CTGAGTTCTT GATTTTGTAT TGGAATGTTC CTTTTTATTT TGGTGGAACA TCATTGCTGA TTATTGTTAT TGTGGTTATG GATTTTATGA CAAACATTCA AGCTCACATG CAATCAGGTC AATACGAAAG TATGATGAAA AAAGCTAATT TAAAGGGTCG GTAA
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Protein sequence | MNSQSIENSG TGGLSQKIFF VLGALIVYRL GTHIPVPLID PVALAAMFEQ QKGTILDMFN MFSGGALQRL SILALGIMPY ISASIIMQLL TVVSPTLEQL KKDGEAGRRK ITQYTRYGTV VLATFQALGV AIALESQNIN GMSVVVEPGL LFKVIAVATL VSGTIFLMWL GEQITERGIG NGISLIIFAG IVAGLPSALG GTFEQVNTGA MHAITAFVLL ALVFLVIAFV VFVERGQRRI PIHYAQRMRG RKLYGGQEGH LPLKLNMAGV IPPIFASSII LFPATLGGWF GTAENMGWLK DIATTMSPGQ PLYILFYAMA IIFFCFFYTA IVFNPNETAD NLRKSGAYIP GIRPGQQTAR RIDTIMSRLT LAGAIYITLV CLLPEFLILY WNVPFYFGGT SLLIIVIVVM DFMTNIQAHM QSGQYESMMK KANLKGR
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