Gene Tcr_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0306 
Symbol 
ID3762567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp352002 
End bp352316 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content38% 
IMG OID637785015 
Productribosomal protein L24 
Protein accessionYP_390576 
Protein GI78484651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0004461 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTC TAAGAAAAGG TGATGAGGTT ATCGTTATTG CTGGAAAAGA CAAAGGGAAA 
CGCGGTTCAG TTTCTCAAGT TATGCAAAAT GGTAAGCTAA TAGTAGATGG AATTAATTTG
GCTAAGAAAC ATGTTAAACC TAACCCTATG ACAGGTGAGC AAGGTGGAAT TGTTTCTAAA
GAGATGCCAG TTGATGCTTC TAATGTTGCT TTATACAATC CTGAAACAAA AAAAGCGGAC
CGTGTCGGCG TTAGAGTTGA AGGAGATGTG AAAACACGTT TCTTTAAGTC TAATGGCAAG
TCGGTTGATG CTTAA
 
Protein sequence
MNRLRKGDEV IVIAGKDKGK RGSVSQVMQN GKLIVDGINL AKKHVKPNPM TGEQGGIVSK 
EMPVDASNVA LYNPETKKAD RVGVRVEGDV KTRFFKSNGK SVDA