| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0258 |
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| Symbol | |
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| ID | 3761428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 307880 |
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| End bp | 308989 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637784963 |
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| Product | general secretion pathway L |
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| Protein accession | YP_390528 |
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| Protein GI | 78484603 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.603796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGC AAGCAATGCA ACGGGAATCG ACACAGCAAA ACCTACACGC CAAACAAGGG
GGTGCCTGGT TTGATTTGTC TGGCAAATTG GTTTTATTGG ACAGTCAGAA AGATCGCCTG
GTGGAGGTGG TATGGGTACC AACACAACAA GTGTTTTTAA CTCAGGTTGT CGTTCCCGGT
AAGCGTAAAA CAGATTGGAT GAAAGCTTTG CCTTATGCGT TGGAAGAGGA AATCAGTCAA
CCGATAGAAG ATGTTTTTAT TGCGGTGCTG CACCGTGATT CAACCGGTGA AAACGCCGGT
TTGACACAGG TGGCGATTGT TTCGAACGAA CGGATGACTC AATGGGTGGA TGCGTTAACC
TCTGCGGGGT TGGCGAATGC TCAATTGGTA CCGGATTGTT TTCAATGTCC TATCCCGGAA
GAACACAACG AGTCGCCGAA AATGCATTAT ATTGAAACAG ACACACATCG ACTGGCTCGA
ACAGGTAAAT GGACTGGCAT GGCAATTCCG CATGACTGGT TAACATTGGC ACCGTTTAAA
CACATGACGT GGCAACAGGA AGCTCCTTCC TTTCAGGTCA TGGAACACTT TAAGCCCTTT
GGATTGCGTC AGGGCAAATA TCAGCCCTTT TCCAAATCGA CGGCTTGGGC AAAAAATTGG
GCTAAAGTCA TTGGTGTTTT TGGTGCATTA CTGGTGCTGT TAGTCACACA GAATTGGATG
GAAGCACACC AGAAAACCAT CGAAAAACAG CAGCTCACCG AAGCGACCGA ACGCTTGTTT
AAGCAAATGT TTCCAGAGGT TAAAAGAATT GTTAACCTGA CGGCCCAGGC GAAAACCGCA
CTGGACCAGC AACCTTCTGA GGTTGCAGGG GTTGGTCCGG CTCAATTAGC GAAGGCTGTC
GAACCCGCTT TTAAGCAAGT TCCGAAAGTC GAAATAAAGG CCTTTAAATG GCAAAACAAA
CGGCTGAGCT TGTCTTTAGA GTCACCGGAT AACGATTCTT TACAAGCGTT AGCCGGTGCG
CTAAAAAATA AAGTGACGTT GACGCTCAAA ATTAACAGTA TGCAACCCAA CCAAATTCAA
GCGGAGATGG TGATTGATGG AATTCGATAA
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| Protein sequence | MDKQAMQRES TQQNLHAKQG GAWFDLSGKL VLLDSQKDRL VEVVWVPTQQ VFLTQVVVPG
KRKTDWMKAL PYALEEEISQ PIEDVFIAVL HRDSTGENAG LTQVAIVSNE RMTQWVDALT
SAGLANAQLV PDCFQCPIPE EHNESPKMHY IETDTHRLAR TGKWTGMAIP HDWLTLAPFK
HMTWQQEAPS FQVMEHFKPF GLRQGKYQPF SKSTAWAKNW AKVIGVFGAL LVLLVTQNWM
EAHQKTIEKQ QLTEATERLF KQMFPEVKRI VNLTAQAKTA LDQQPSEVAG VGPAQLAKAV
EPAFKQVPKV EIKAFKWQNK RLSLSLESPD NDSLQALAGA LKNKVTLTLK INSMQPNQIQ
AEMVIDGIR
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