| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0256 |
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| Symbol | |
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| ID | 3761521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 306311 |
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| End bp | 306925 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637784961 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_390526 |
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| Protein GI | 78484601 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.745018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGATT CAAAGATCAC TGTAAAACGA CAGACGGGCT TTACATTGAT TGAGCTGCTG
ATTGCGATGG CGATTTCAGC GGTTTTGGCG TTATTGTCTT ATCAAGCGAT TCATGAAGTT
ACTCAGGTGA AGTTAACGTC AGACTCGAAA AATGAGCGGT TCAGTGCATT ACAGCGTGCG
ATATGGTGGA TGGAACAGGA TTTCTCGCAA ATGGCGCCTC GGCCTGTTCT GGATGCGTTA
GGTTCGATGT TACCCAGTTA TCTGGCCAGT GAGAATCAGG TGGAGCTCAC TCGTATCGCC
ACGTATCCTT CACCTTATGG TGAAAGCGGC TTGGTTCGAG TGGGCTATGC TTTAGAAGGT
GAGACCTTGT ATCGTTTGGT TTGGCCTGTC TTGGATCGCG CTCCTGATAC GCAACCCCAA
AAATGGGTGT TACTGGAAGG GGTCAAACGG TTTGAGGTGC GTCAACAAGA CCAAAATAGA
CAATGGCAAC GATTTTGGCC TCAAGCCGAA TTGGATGAAA CGTCTATGAA AAAACAGCCA
GGCCTGGTCG AAATTCGATT GGACTATGAA GGGGTGGGCT TGATTAGGCG ATTGATCGTT
GGAGCGGATC GTTGA
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| Protein sequence | MSDSKITVKR QTGFTLIELL IAMAISAVLA LLSYQAIHEV TQVKLTSDSK NERFSALQRA
IWWMEQDFSQ MAPRPVLDAL GSMLPSYLAS ENQVELTRIA TYPSPYGESG LVRVGYALEG
ETLYRLVWPV LDRAPDTQPQ KWVLLEGVKR FEVRQQDQNR QWQRFWPQAE LDETSMKKQP
GLVEIRLDYE GVGLIRRLIV GADR
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