Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0247 |
Symbol | |
ID | 3761512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 296525 |
End bp | 297967 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637784952 |
Product | pyruvate kinase |
Protein accession | YP_390517 |
Protein GI | 78484592 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0469] Pyruvate kinase |
TIGRFAM ID | [TIGR01064] pyruvate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000162471 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATCTG GTTTAAGAAG AACAAAAATT GTTGCAACGT TAGGTCCAGC AACGGACAGA GACGGTGAAT TAGAAAAAAT GATTAAAGAA GGGGTCGATG TTGTTCGTAT CAACATGTCT CACGGAAACC CTTCAGAACA TATTGAAAGA GCGCAGAATG TCCGTGATAT TGCGGCACGA TTAGATCGCG AAGTCGGGAT TTTAGTCGAC CTTCAAGGTC CTAAAATTCG TATTGCCCGT TTTTCAGAAG GCAGTATTTT TCTAGAGCAA GGGGATAAAT TCTCATTAGA CAATAATGTT GATCCTTTGG CTGGGAACCA AAAAGAAGTT GGTTTGACGT ACAAGAGTCT GCCTTATGAT GTTAAAGCAG GTGATCGTCT ATTACTGGAT GATGGCCGCG TGGTTCTAGA TGTTGACAAC GTTGAAGGTG AGCGTGTTAA CTGTACCGTT GTTGTGGGTG GTAAATTATC AAACAACAAA GGAATCAATT TGCATGGTGG TGGGTTATCA GCCGCTGCGT TGACGGAAAA AGATAAAGAA GATATTCTGA CGGCAGCTGA AATTCAATGT GACTATTTAG CCTTATCGTT CCCAAGAAGT GCGGAAGATG TGGAATATTG TCGTTCACTG GCTGAAAAAG CCGGATTGGT TTGCAGCATC GTTTCAAAAA TTGAACGTGC TGAAGCCGTA AATGATGATT TTACATTGGA CGGCATTATC TTAGCTTCTG ATGTGATTAT GATTGCGCGC GGAGACCTAG GGGTTGAAGT GGGTGATGCT CAATTGCCAG CGCTGCAGAA GAAAATGATT AAACGTGCGC GTCAATTAAA TCGTATTACC ATTACAGCAA CACAGATGAT GGAAACGATG ATTGAGAATG CAATCCCGAC GCGTGCTGAA GTGTTTGACG TTGCCAATGC GGTAATGGAT GGTACGGATG CGGTGATGTT GTCAGGTGAA ACGGCAACAG GCCACTCTCC AAGCCTTGTT ATTAAGACGA TGTCTGACAT TGCGCATGAA GCTGAAAAAT CAAGAAGCAC ACGTGAATCG ACACACCGTA TTGATGAGTT TTTTACAGCG GTGGATGAAA CGATTGCGAT GTCGGCTATG TACGCAGCGA ACCATTTTGG TGTACAGTGT ATTGCCGCTT TGACTGAGTC GGGTAATACG CCATTGTTGA TGTCACGTAT CAGCTCGGGT ATTCCAATCA TTGCTTTGAC ACCACACATT GATACGCGTC GTAAAGTGAC GCTTTATCGT GGTGTTTATC CAACAAGCGT TGATTATACG GGGCTTAATG ACGATCAAGT GAAAGACCGT ATTTTGGAAG AGTTAAAAGA AAAAGGTGTG GCTAAATCAG GTGATCTGAT TATTGTAACT CGTGGGCAAT CACGTGGAGC AATGGGCGGC ACGAATCAAA TGGAAATCGT TAAAGTACCT TAG
|
Protein sequence | MPSGLRRTKI VATLGPATDR DGELEKMIKE GVDVVRINMS HGNPSEHIER AQNVRDIAAR LDREVGILVD LQGPKIRIAR FSEGSIFLEQ GDKFSLDNNV DPLAGNQKEV GLTYKSLPYD VKAGDRLLLD DGRVVLDVDN VEGERVNCTV VVGGKLSNNK GINLHGGGLS AAALTEKDKE DILTAAEIQC DYLALSFPRS AEDVEYCRSL AEKAGLVCSI VSKIERAEAV NDDFTLDGII LASDVIMIAR GDLGVEVGDA QLPALQKKMI KRARQLNRIT ITATQMMETM IENAIPTRAE VFDVANAVMD GTDAVMLSGE TATGHSPSLV IKTMSDIAHE AEKSRSTRES THRIDEFFTA VDETIAMSAM YAANHFGVQC IAALTESGNT PLLMSRISSG IPIIALTPHI DTRRKVTLYR GVYPTSVDYT GLNDDQVKDR ILEELKEKGV AKSGDLIIVT RGQSRGAMGG TNQMEIVKVP
|
| |