Gene Tcr_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0207 
Symbol 
ID3761646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp244236 
End bp246440 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content45% 
IMG OID637784912 
ProductABC transporter related 
Protein accessionYP_390477 
Protein GI78484552 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID[TIGR03375] type I secretion system ATPase, LssB family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACG ACCAAGCCTC TGCTGCCCGC CAAAACGAAG AGACTCACAC AGACACTTCT 
GCAGTAGACC TAGGACAACC GGTGATCGAT TTTAAGGATC CTCTATTGGA TTGCTTGGTA
ATCTACACCA AGCTCAATCG ACACCCCTTT TCCAAAGATG CCTTAATATC AGGGTTGCCT
TTAGCAAACC ATGACCGCTT AACGCCTGAA TTATTCATTC GCGCCGCTGA CCGCGCCAAC
ATTGTCGCCA GCTTTAAAAA ACGCGCGTTA AAAGACATTC CTAACCTGGT AATGCCGTGC
ATCCTGACAC TGAAAAACAA CCGGGCCTGC CTGTTAGAAA AAATAGACCT CGATGCCGAA
AAAGCGACCG TGGTCTTATC GGATGCCCCG GATGGTCGAC TCGAGGTCGA CTTAAAGCAA
CTGGAAGAAG ACTATCTGGG CTATGCCATT TACTTTACTG AAAAATTTCA ACAGGCTTCT
AAAAAAGAAG ACCTGATCTC CACCGGCCAG GGACACTGGT TTTGGCATAC CTTCTGGGAC
AACCGCGGTA TTTACCGCGA CGTCTTAATC GCCTCGGTGA TTATCAATAT TTTTGTACTG
GCAAACCCTC TGTTTGTGAT GAACGTTTAT GATCGCATTG TGCCGAATAA TGCCGTCGAA
TCCCTTTGGG TTCTGGCAAT CGGCATCAGT GTCGTTTATA TGTTCGATAT TCTGCTGAAG
TTTCTTCGTT CTTATTTCCT AGAAATGGCC GGCAAAAAAA GTGATGTCAT CATGTCTTCC
AAGCTCTTTG AACAGACTCT TGGGCTGACC ATGGCCAATC GTCATGGTTC TATCGGAGCC
TTTGCCAACA ACTTAAAAGA ATTCGACAGT ATTCGGAACT TCTTTACCTC CGGCACCATT
GCTTCTTTAG TGGATTTACC GTTTGTCGTT ATCTTCTTAC TGGTTATTTT CTTTATTGCA
GGTCAAATCG TATTGGTTCC GATCGCCATT ATCGGCTTGA TACTGATGTA TAGCATTCTC
ATGAAAAAGC CGATTCAAAG CAGTGTAGAA GCCACTTATG AAGCGTCTTC ACAGAAAAAT
GCCGTTTTAA TTGAAACCTT AACCGCCATT GAAACCATTA AATCACTCGG TGTTGAAGCC
CATTCGCAAT GGAAATGGGA ACAAGCGGTC GGAGAGATTG CCCGCGCCAG CTTAAAATCC
AAAATGCTAC AAAGCTCGAT CGGTCGCGTG ACTGGGTTTA TGCAGCAAAT GAGTACGGTT
ATTATTGTTC TGGTAGGCGT CTACCTGATT AAAGATGGGC TGTTAACGAT GGGGGGCTTA
ATTGCCACCG TGATGTTAAG CCAAAGATCC ATTGGCCCGA TGGGACAATT TGCCAGCTTA
ACCTCAACCT ATCAACAAAC GAAAACCGCT CTGGACTCGT TGAATGAGCT GATGAAGAAA
GAAGTGGAAC GTCCGTCAGG TAAACGTTTT ATTCAACACC CTGTTTTTGA GGGCTCTATT
GAATTTATCG ATGTCACCTT TACCTATCCG GGAGAAACCA AACCGGCTTT GAATAACGTT
TCTTTTAAAG TTAATCCTGG CGAAAAACTA GGCATTATCG GACGAATCGG TTCCGGAAAA
TCCACAATCG AAAAGCTCAT CCTTGGTTTT TATCATGTCG ATTCTGGGTC GATCTTAATC
GATGGCATTG ACATCACACA GCTTGACCCG GCCGAATTAC GACGCAACAT TAACTATGTG
CCGCAAGATG TGACCTTATT CAGTGGTGAT GTCCGTGAAA ATATCGCTTA TCGAGCCCCT
TACGTTGAAG ACAGTGAAAT CCTGCGAGCA GCGAAATTGG CCGGCGTGGA CGACTTCATT
AAAACCCACC CTTCCGGCTA CAGCTTAAAA GTTAATGAAG GCGGGGGGTC TTTATCAGGC
GGTCAACGTC AAAGCATCGG CGTGGCACGT GCATTATTAC TTGATACACC GATTTATCTA
TTTGATGAAC CAACAAATGC AATGGATGCC AACACGGAAC AAACCATGAT AGACCGCCTT
AAAAAAGGCA CCTTGAAAAA TACCACAATT GTTGTAACCC ATAAAATGAG TTTGTTACAG
CTTGTTGATC GTTTAATCGT CATGAGTAAT GGTAAAGTGA TTGCAGATGG TTCAAAGGCA
ACGGTATTGG AAGCCTTAAA AACAGGACGG ATTAATAAAG CATAA
 
Protein sequence
MENDQASAAR QNEETHTDTS AVDLGQPVID FKDPLLDCLV IYTKLNRHPF SKDALISGLP 
LANHDRLTPE LFIRAADRAN IVASFKKRAL KDIPNLVMPC ILTLKNNRAC LLEKIDLDAE
KATVVLSDAP DGRLEVDLKQ LEEDYLGYAI YFTEKFQQAS KKEDLISTGQ GHWFWHTFWD
NRGIYRDVLI ASVIINIFVL ANPLFVMNVY DRIVPNNAVE SLWVLAIGIS VVYMFDILLK
FLRSYFLEMA GKKSDVIMSS KLFEQTLGLT MANRHGSIGA FANNLKEFDS IRNFFTSGTI
ASLVDLPFVV IFLLVIFFIA GQIVLVPIAI IGLILMYSIL MKKPIQSSVE ATYEASSQKN
AVLIETLTAI ETIKSLGVEA HSQWKWEQAV GEIARASLKS KMLQSSIGRV TGFMQQMSTV
IIVLVGVYLI KDGLLTMGGL IATVMLSQRS IGPMGQFASL TSTYQQTKTA LDSLNELMKK
EVERPSGKRF IQHPVFEGSI EFIDVTFTYP GETKPALNNV SFKVNPGEKL GIIGRIGSGK
STIEKLILGF YHVDSGSILI DGIDITQLDP AELRRNINYV PQDVTLFSGD VRENIAYRAP
YVEDSEILRA AKLAGVDDFI KTHPSGYSLK VNEGGGSLSG GQRQSIGVAR ALLLDTPIYL
FDEPTNAMDA NTEQTMIDRL KKGTLKNTTI VVTHKMSLLQ LVDRLIVMSN GKVIADGSKA
TVLEALKTGR INKA