Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0187 |
Symbol | trkA |
ID | 3762243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 219221 |
End bp | 220618 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637784892 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_390457 |
Protein GI | 78484532 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAA TTATTCTTGG TGCCGGACAA GTCGGTACAT CACTTGCAGA GCTGCTTGCC ATCGAAAACA ATGATGTCAC AGTGGTTGAC CTTGATAGAA CCAATCTTCA ACGGTTACAA GATCGGTTGG ACATTCGTAC TGTGAATGGT CACGCCTCTA ACCCAGACGT CTTAAACCAA GCCGGTTTGG AAGAAGCCGA TATGTTGATC GCCGCCACAC ACGAAGATGA CACCAATATC GTTGCCTGTC AGTTGGCTCA GATCATGCAT AAAACGCCCA CCAAAATTGC GCGCGTTAGA AGTCAAAGCT ACTTAAACCA CCCTGAATTG TTTGATCGAC AACAGAATAC GGATGCGATC CCAATCAATG TTTTAATCAG CCCTGAAACG CTGGTTAAAA ACTATATCCT GCAATTGATT AACTACCCGG GTTCGCTTCA AGTGGTTGAT TTCTCAGAAG GGAAAGTTCG ATTGGTCGCC ATTCGGGCTC ACTCTGGCGG CATGATTGTC GGCAAAAAAA TTCGAGAAAT TAAACACCAT TTACCAGATG GCGTCCATCA CAGGATTGTT GCTATCTATC GACGAGATGA AATCGTCATC CCAACCGGCA ACGTCACCAT TCAGGTTGGC GACGAAGTTT TCTTTCTCGC CGAACCGTTC AATATTCCTA AAATTGTTCA GGAATTGCGA CGTGATAAAC TCCGCCCCTC AAGAAACATC ATGATCGCAG GGGGAGGCAA CATTGGCTTC AACCTCGCCA AAGAGTTGGA AAAAGAGCAT CAGGTTAAAA TTATCGACCA CAATATGACG CAAGCACGGA AGATTTCTGA GCAGCTGGAG CAGTCCATTG TCATTCGAGG AGACGTTTCC GACAAATCCT TGCTCATTGA AGAAAACATT GATGAAATCG ATTTATTTTT AGCGCTGACG AATTCCGATG AAGCTAATAT TATTTCAGGC ATGCTGGCCA AAAAATTAGG CGTTCGTCGT GTCATTGCCT TGGTAAACAA CCAGTCTTAT GTGGATTTAA TTCAACTGAA CAGTATCGAT GTCGCGATCT CAGCAGACCA GATCACCACG AGCCGCTTAC TGCACTATAT GCGTCAAGGC GATACCGTCA AAGCGTTTAC GTTGCGGCGA GGCGCAGCAG AAGCCATGGA AGTGATTGTG CATGGAAGCG AAAACTCTTC TGAGATTATT GGAAAAACCA TTGGGGAAAT TCAATGGCCG ACCAGCATTA CCATTGGGTG CATTGTGCGT GAAAATGAAG TCCTGTTCTC GCACCGAGAT CTAACGATTG AAGCAGAAGA CCATGTCATC CTTTTCTTGA ATGATCCTAG CCAAGCGGGC CAAATTACAG AGCTCTTTAC ACCAAAGGAA AAGAAAAGTT GGTTTTAA
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Protein sequence | MNIIILGAGQ VGTSLAELLA IENNDVTVVD LDRTNLQRLQ DRLDIRTVNG HASNPDVLNQ AGLEEADMLI AATHEDDTNI VACQLAQIMH KTPTKIARVR SQSYLNHPEL FDRQQNTDAI PINVLISPET LVKNYILQLI NYPGSLQVVD FSEGKVRLVA IRAHSGGMIV GKKIREIKHH LPDGVHHRIV AIYRRDEIVI PTGNVTIQVG DEVFFLAEPF NIPKIVQELR RDKLRPSRNI MIAGGGNIGF NLAKELEKEH QVKIIDHNMT QARKISEQLE QSIVIRGDVS DKSLLIEENI DEIDLFLALT NSDEANIISG MLAKKLGVRR VIALVNNQSY VDLIQLNSID VAISADQITT SRLLHYMRQG DTVKAFTLRR GAAEAMEVIV HGSENSSEII GKTIGEIQWP TSITIGCIVR ENEVLFSHRD LTIEAEDHVI LFLNDPSQAG QITELFTPKE KKSWF
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