Gene Tcr_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0180 
Symbol 
ID3762236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp213234 
End bp214010 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content45% 
IMG OID637784885 
ProductABC transporter related 
Protein accessionYP_390450 
Protein GI78484525 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4559] ABC-type hemin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACAG CGGAAAAACT GTGTGTTGAA CGTCAAGGGC ATCGTATCTT ATCGGATGTA 
TCCGTTGAAA TTTCCCCAGG GCAGGTTGTC GCTGTCTTAG GGGCAAATGG GGCTGGAAAA
TCGACCCTTT TGCAGTGCTT AAGTGGTGAT GTCAGTGAAG CGAAACAGCA CGTATTTTTA
AACGGAAAAA ACTTAGATTC TTATACCTCT CAAGCGTTGG CCATGGCGAG GGCCGTTATG
CCTCAAAGTG TGCAAATGGA TTTTGCCTTT TTAGTTTCTG AACTGGTTGA AATGGGACTG
TGGCAAATCC CACGACAATC CGATAAACAA CAACGAGTGG ATGAAGCCCT GGCGTTGTTT
GGCATTGAGA CATTGAAGCA GCGCGATTAT CAAACGTTAT CCGGTGGAGA GCAGCAACGA
GTGCAGTTAG CTCGTGTCGT TGCGCAGTTA TTAACCCCCA TTGCCCAGGC CGATGCACCG
CGTTACTTGT TGTTAGATGA ATGCACCGCG AATTTAGATT TTGCTCATCA ACATCAGGTA
TTTGAAGTGG TTAAAAAATT AGCGAATACC TATCAAATGG GGGTTGTCGT GGTGTTGCAT
GATATGAATT TAGCGGCGCA ATATGCAGAT CACTTAGTAT TGTTAAAACA GGGAAAAGTA
TTAGATCAAG GGTCGGTCGA AAGCATGCTG ATACCATCCA AGATAGAAGA GCTGTATGAT
TTTCCTGTTC AAGTTTTACC CCATCCAAAG GGCTGGCCAA TGATTGTTCC GGCTTAA
 
Protein sequence
MLTAEKLCVE RQGHRILSDV SVEISPGQVV AVLGANGAGK STLLQCLSGD VSEAKQHVFL 
NGKNLDSYTS QALAMARAVM PQSVQMDFAF LVSELVEMGL WQIPRQSDKQ QRVDEALALF
GIETLKQRDY QTLSGGEQQR VQLARVVAQL LTPIAQADAP RYLLLDECTA NLDFAHQHQV
FEVVKKLANT YQMGVVVVLH DMNLAAQYAD HLVLLKQGKV LDQGSVESML IPSKIEELYD
FPVQVLPHPK GWPMIVPA