| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0139 |
|---|
| Symbol | |
|---|
| ID | 3762508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 172136 |
|---|
| End bp | 172879 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637784844 |
|---|
| Product | glutaredoxin-like region |
|---|
| Protein accession | YP_390409 |
|---|
| Protein GI | 78484484 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin
[COG0695] Glutaredoxin and related proteins |
|---|
| TIGRFAM ID | [TIGR02190] Glutaredoxin-family domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.406414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAG CTTTAGAAAA CAAAGAAGGT CAAACCGTTC CAAGTGTTGT CTGGCCAACG
CGTCAAAACA ACGAGTGGGT GAATGTCAAA AGTGATGATA TCTTTAAAGG GCGCACAGTA
GTCGTGTTCT CTTTACCAGG GGCCTTTACC CCAACATGTT CATCTTCTCA CTTGCCTCGT
TACAATGAAC TTGCGCCGGT TTTCTTTGAA AACGGTGTGG ATGAAATTGT GTGCTTGTCT
GTCAATGACA CGTTTGTCAT GAATGAGTGG GCAAAAGATC AGGAATGCAC GAACGTCACA
CTGATTCCAG ACGGAAATGG TGAGTTTACG GATGGCATGG GCATGCTGGT AGATAAATCG
GATTTAGGAT TTGGTAAGCG TTCATGGCGT TATTCAATGC TGGTTAAAGA CGGCGTTGTT
GAAAAAATGT TTATCGAACC GAATGTTCCA GGCGACCCAT TTGAAGTGTC CGATGCGGAT
ACCATGTTGA AATACATCAA CCCAAATGCT CAACCTAAGA AAGTAGCGAC TATCTTTACC
AAGCCAGGTT GCCCTTTCTG TGCGAAAGCG AAAGCCGCGT TGGAAGATGC TGGAATTGAG
TATGAAGAAA TTACGGTTTC TCATGCCGAT GTCACGTCAC GTACATTACG TGCCGTAGCC
AATGCAGATA CCGTTCCTCA AGTCTTTATT GAAGGACAGC ATATTGGCGG GTCTGACGAT
TTGGAAGCGT ATTTAGCTAA ATAA
|
|---|
| Protein sequence | MSQALENKEG QTVPSVVWPT RQNNEWVNVK SDDIFKGRTV VVFSLPGAFT PTCSSSHLPR
YNELAPVFFE NGVDEIVCLS VNDTFVMNEW AKDQECTNVT LIPDGNGEFT DGMGMLVDKS
DLGFGKRSWR YSMLVKDGVV EKMFIEPNVP GDPFEVSDAD TMLKYINPNA QPKKVATIFT
KPGCPFCAKA KAALEDAGIE YEEITVSHAD VTSRTLRAVA NADTVPQVFI EGQHIGGSDD
LEAYLAK
|
|---|
| |