Gene Tcr_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0132 
Symbol 
ID3762501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp165926 
End bp166519 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content42% 
IMG OID637784837 
ProductYfaZ 
Protein accessionYP_390402 
Protein GI78484477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00180457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT TTACACAATT ACGTAAGTTT GTTTTAGTCA TCGGGATGGG GTCTGTTTCA 
ATGGGCGCTT ATGCGATTGA AGGAAATGCC GGTCTGGATT TGTCATTGTC CAATGATGCT 
GGGAATATTG GACTTTATTC GTTACGAGAA ACCCCTCATG AACTGACAAA TTTGGGTGCG 
GACTTTCTTT TTAACAGTAA AAGCGATCGT TTCTTAGATG TATATGGAAG CTTGGCCAGA 
AAAGGTTTGC TGGGAAATAA AAACCTTGAG TTAGGTTTAA AAGGTAAGTT GTTTTATATT 
GATGAAGATA AAAGCAATCA AGATGGTTAC GGTCTGATGA TTGGTGGGCT AGGTCGTTAT 
TGGCTGCCGA CTGAAATCCC AGCAGCGGTT GCCATGGAAT ACCTTTACGG GCCGGCTATT 
GTCACGTCTG GAGACGCAGA TACGGCTTCA GAATTCAATG CCCGTGTTGA AATGAGAATT 
TTGCCAAGTG CAGTTGGTTA TGTCGGTTAT AGAAAGCTTA ATATGGAATT CAACAACACT 
AACTATGAAG TGGATGACAG CCTGCACCTT GGTGTTAGAG TGGCTTTTCA GTAA
 
Protein sequence
MKIFTQLRKF VLVIGMGSVS MGAYAIEGNA GLDLSLSNDA GNIGLYSLRE TPHELTNLGA 
DFLFNSKSDR FLDVYGSLAR KGLLGNKNLE LGLKGKLFYI DEDKSNQDGY GLMIGGLGRY 
WLPTEIPAAV AMEYLYGPAI VTSGDADTAS EFNARVEMRI LPSAVGYVGY RKLNMEFNNT 
NYEVDDSLHL GVRVAFQ