Gene Tcr_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0129 
Symbol 
ID3762498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp162904 
End bp163512 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content49% 
IMG OID637784834 
ProductABC transporter related 
Protein accessionYP_390399 
Protein GI78484474 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00335673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAG TAGACAATCT TTCAAAACGT CCTTTTTTAA ACCCGGTTTC TTTTTCTTTG 
GCGGCGAGTG AAGTGTTGGT GGTTTCCGGC GTTTCGGGTT CTGGAAAATC GGTTTTGTTG 
CGTGCGCTGG CCGATTTAGA TCCTCATGAA GGCGATGTGC ATTTGGCAGG AAAAGCACAG 
GCGGGCTGGA AAGTGACCCA ATGGCGTAAA AAAGTCATGT GGTTTCCGGC AGAAACGGCC 
TGGTGGGAAG ATTCGGTTGC AGCGCACTTT CCTGAAACGG ACACAAAAAA TGGCCAGGCC 
TGGTGGCTTT CGGCCTTAGA AAAGCTGTCC TTACCCTCCA GCATTTTAAA GAAATCGGTG 
GATAAACTTT CCAGTGGCGA AAAGCAGCGC CTGGCGTTGA TTCGAGGATT GATTGAACGC 
CCTCAGGTGT TGTTACTGGA TGAGGTTACG GCGAATCTTG ATCCAAAATC CACCTTAGCG 
GTGGAAGCCT TGATTTCAGA GTATTTGTCT GAGCAGCAGG CATGTGCTGT TTGGGTCACG 
CATGATCCGC AACAAGCCAA GCGTGTGGCC AGTCAACAGC TTGAATTAGG TCGTGATGCT 
ACCGATTAG
 
Protein sequence
MFQVDNLSKR PFLNPVSFSL AASEVLVVSG VSGSGKSVLL RALADLDPHE GDVHLAGKAQ 
AGWKVTQWRK KVMWFPAETA WWEDSVAAHF PETDTKNGQA WWLSALEKLS LPSSILKKSV 
DKLSSGEKQR LALIRGLIER PQVLLLDEVT ANLDPKSTLA VEALISEYLS EQQACAVWVT 
HDPQQAKRVA SQQLELGRDA TD