| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0128 |
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| Symbol | uvrD |
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| ID | 3762497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 160678 |
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| End bp | 162903 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637784833 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_390398 |
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| Protein GI | 78484473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000143952 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT CACATATATT AAATGACTTA AATGATGCGC AACGTGACGC TGTTACGGTG
GAAGATCAGC ACGCCTTAAT TTTGGCTGGC GCCGGCAGTG GTAAAACACG AGTTTTGGTG
CATCGCATTG CCTGGTTGAC TCAGGTGATG GGGTTTTCAG CGTATAACAT TTTAGCCGTG
ACCTTTACCA ATAAGGCGGC CAGCGAAATG CGTGCGCGAG TTGAAGCGTT GATCGGCAAT
CAGTCACAAG GCATGACGAT GGGCACCTTT CATGGTATCG CTTATCGATT GCTCCGCACA
CACTATAAAG AGGTTGGATT GCCACAGAGT TTTCAAATTC TGGATTCGGA TGACCAAAAG
CGAGTGATTA AGCGCCTGTT AAAAGCGCTG GAGCTGGATG ACGCACAATG GCCTCACAAA
CAAGTACAAG CTTTTATCAA TGGTGAAAAA GAAGAGGGAC GTCGTCCACA TCATATTGAC
CCCGGCCACA ATCCTTACGT GCGTCAAATG GTGCAAATTT ATCAAGCGTA CGAAGAACAA
TGTAAACGGG CAGGCCTGGT GGATTTTGCG GAGCTCTTAT TGCGAGCGCA TGAACTGTGG
TTGAAAAACC CGCAAGTGTT AGCGCATTAT CAAGCCCGTT TTCGTCATAT TCTGGTGGAT
GAGTTTCAAG ACACCAATAG CTTGCAATAT GCTTGGCTTC GGGTGTTGGC CGGTGCCAGC
GGGCGGCTAT TCATTGTTGG AGATGACGAT CAGTCGATTT ATGGATGGCG TGGGGCCAAA
ATTGAAAACA TTCGCCGCTT TGATGAAGAT TTTTCCGACG TCAAAACCGT TCGCTTGGAG
CAGAACTATC GTTCCACCGG CACGATTCTT AAAGCCGCCA ATGGGTTGAT TGCTTTTAAC
CAGGATCGCA TGGGCAAAAA TCTTTGGAGT GCGGGCGAGG AAGGCGACCC CATTCGCATC
TATGAAGCCT TTAATGAGTT GGATGAAGCG CGTTATGTGT GCAACCAAGT TGAAAGTTGG
TGTGAACAAG GTGGCAGCCG TTCGGAAGTT GCTGTTTTGT ATCGTTCCAA CGCACAATCT
CGTGTGATGG AACAAGCGTT GTTGCAAGCG CAGATTCCGT ATCGCGTGTA TGGTGGCCTG
CGCTTCTATG ATCGCGCCGA AATTAAAGAC GTGCTGGCGT ATTTACGATT GCTGGTCAAC
ACCGAAGACG ATGCCGCTTT TGAGCGGGTT TATAACCACC CACCGCGAGG AATTGGGAAT
AAAACCGCCG ATCAAATTCG AGAAGTGGCG CGCATGCAGG AAATTTCATT ATGGCAAGCC
GCCACGCAAA TGGCGCAGGA TGGTTTGACC GCACGCGCAA AAACGGCCGT AAATGGTTTT
TTATCTTTAA TCGAGTCGTT AAAAGACAGC ACGGCAGAAT TAACCTTGCA GGATCAGGTC
ATTCAGGTGA TTTCGCGTTC CGGGTTGCAA TTGCATTTTG AAAAAGACAC CTCTGAACAA
GGCCAAAGCC GTCTTGAAAA CCTAGACGAA CTGATTAATG CCGTGAGTGT GTTTAAACCG
GTACAAGATA ATGACACTGT GGAAGGCGTC GTACCGGAAG AGGCGGCGAT GACCGAAGCG
TTTGATCAAC CCAATTTTGA AAATCCACTG GCCGAGTTTT TGGCTCAAGC CGCTCTGGAA
GCAGGCGAAC AACAGGCCGA TCAGTGGGAA TCTTCGGTTC AGTTGATGAC ATTGCATGCG
GCGAAGGGTC TTGAGTTCCC ACTGGTGTTT ATGATTGGCT TGGAAGAGGG GCTTTTCCCA
TCTCAGCAAT CACAGGAAGA CCCTTATCGT TTGGAAGAAG AGCGTCGTCT GGCTTATGTT
GGGATAACAC GAGCCGAAAA GCAGTTAATG ATTTCCTTCG CCAATCGACG TCGAATGCAT
GGTTCGGAAT TTTATCCGTT GCCTTCGCGG TTCATCAAAG AAATTCCGGA CGACTGCGTT
CAAATGGTGC GTTTGAGTGG TTCGGTTAAA CATTATGGTG AGACTGCGTC GCATGCCAAT
AAAGGGTTTG CATTACCGAA CGAATCCGGT TTTAGGGTGG GAGAAAATGT CTTTCATCAA
AAATTTGGAG AAGGCACTGT GCTGGGAACC GAAGGCGCGG GCGACCATGC CCGTATTCAA
GTCAACTTTA CGCATGCTGG CACGAAATGG TTAGTGGCGG CGTTTGCCAA ACTTGAGAAA
CGTTAA
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| Protein sequence | MDISHILNDL NDAQRDAVTV EDQHALILAG AGSGKTRVLV HRIAWLTQVM GFSAYNILAV
TFTNKAASEM RARVEALIGN QSQGMTMGTF HGIAYRLLRT HYKEVGLPQS FQILDSDDQK
RVIKRLLKAL ELDDAQWPHK QVQAFINGEK EEGRRPHHID PGHNPYVRQM VQIYQAYEEQ
CKRAGLVDFA ELLLRAHELW LKNPQVLAHY QARFRHILVD EFQDTNSLQY AWLRVLAGAS
GRLFIVGDDD QSIYGWRGAK IENIRRFDED FSDVKTVRLE QNYRSTGTIL KAANGLIAFN
QDRMGKNLWS AGEEGDPIRI YEAFNELDEA RYVCNQVESW CEQGGSRSEV AVLYRSNAQS
RVMEQALLQA QIPYRVYGGL RFYDRAEIKD VLAYLRLLVN TEDDAAFERV YNHPPRGIGN
KTADQIREVA RMQEISLWQA ATQMAQDGLT ARAKTAVNGF LSLIESLKDS TAELTLQDQV
IQVISRSGLQ LHFEKDTSEQ GQSRLENLDE LINAVSVFKP VQDNDTVEGV VPEEAAMTEA
FDQPNFENPL AEFLAQAALE AGEQQADQWE SSVQLMTLHA AKGLEFPLVF MIGLEEGLFP
SQQSQEDPYR LEEERRLAYV GITRAEKQLM ISFANRRRMH GSEFYPLPSR FIKEIPDDCV
QMVRLSGSVK HYGETASHAN KGFALPNESG FRVGENVFHQ KFGEGTVLGT EGAGDHARIQ
VNFTHAGTKW LVAAFAKLEK R
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