| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0126 |
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| Symbol | rho |
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| ID | 3762495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 158553 |
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| End bp | 159812 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637784831 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_390396 |
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| Protein GI | 78484471 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000206271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA ACGATCTCAA AAAAATGTCA GCCGCCGCTC TTCTAGAAAT CGCAGCTGAA
AAAGGCCTAG AAAATCTAGC CCGATTAAAA AAACAAGACA TTATCTTCGC CATCTTAAAA
GCACACGCGA AAAGTGGAGA AGATATCTAT GGCGAAGGCG TCTTAGAAAT CCTACCGGAT
GGGTTTGGAT TTCTTCGATC AGGAGACGGC TCTTACTTAG CAGGACCGGA TGATTTATAT
GTCTCTCCGA GTCAAATCAG ACGCTTTGGA CTCCGTAAAG GGGATACCAT CCAAGGTAAA
ATTCGCCCAC CAAAAGACAG TGAACGTTAT TTTGCACTGT TGAAAGTAGA GCGTATCAAC
TTTGAAGACC CGGACGTTGC TCGTAAGAAA ATCGCATTTG AAAACCTGAC CCCACTTCAT
GCGCAAGAAC GCTTGAAAAT GGAATCCGGA AATGGCAGCA CCGAAGACAT CACGACTCGA
ATCATTGACA TCGCAGCTCC CTTTGGTAAA GGGCAGCGCG GCTTGATTGT TGCCCCGCCA
AAATCCGGTA AAACGGTTAT TTTGCAGCAA ATTGCACAAT CGATTGCTGA AAACCATCCA
GAAGCGTACT TAATTGTTCT GCTTATTGAT GAGCGTCCTG AAGAAGTGAC TGAAATGCAA
AGAACCGTTA AAGGGGAAGT GATTTCATCG ACTTTTGATG AACCGGCTAC ACGCCACGTT
CAGGTAGCTG AAATGGTCAT CGAGAAAGCA AAGCGTCTGG TAGAACACAA AACAGATGTG
GTGATCTTAC TGGATTCCAT TACACGTCTG GCCCGTGCGT ATAATACGGT CGTGCCGTCT
TCCGGTAAAA TCTTGACGGG GGGGGTGGAT GCCAATGCGC TTCACCGTCC TAAACGATTC
TTTGGTGCCG CTCGAAACAT TGAAGAAGGC GGTTCCTTGA CCATTATCGC AACCGCATTG
GTTGATACCG GCTCTAAAAT GGACGAAGTG ATCTTTGAGG AATTCAAAGG AACGGGTAAC
ATGGAGCTTC ACTTATCTCG TAGTATTGCT GAAAAACGTA CTTTCCCTGC GATCAATATT
GAGAAGTCAG GTACACGTAA AGAAGAGTTG CTGACCACGC CTGATGAGCT GCAAAACATT
TGGATTTTAC GTCGTTTCTT ACAAGGCTTA AACAATGAAG TTGAGGCAAT TGAAACGTTA
ATTGACCAAC TCAAAGTAAC CAAAACCAAT GATGAACTCT TTACGGCGAT GAAACGATAA
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| Protein sequence | MNLNDLKKMS AAALLEIAAE KGLENLARLK KQDIIFAILK AHAKSGEDIY GEGVLEILPD
GFGFLRSGDG SYLAGPDDLY VSPSQIRRFG LRKGDTIQGK IRPPKDSERY FALLKVERIN
FEDPDVARKK IAFENLTPLH AQERLKMESG NGSTEDITTR IIDIAAPFGK GQRGLIVAPP
KSGKTVILQQ IAQSIAENHP EAYLIVLLID ERPEEVTEMQ RTVKGEVISS TFDEPATRHV
QVAEMVIEKA KRLVEHKTDV VILLDSITRL ARAYNTVVPS SGKILTGGVD ANALHRPKRF
FGAARNIEEG GSLTIIATAL VDTGSKMDEV IFEEFKGTGN MELHLSRSIA EKRTFPAINI
EKSGTRKEEL LTTPDELQNI WILRRFLQGL NNEVEAIETL IDQLKVTKTN DELFTAMKR
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