Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0112 |
Symbol | |
ID | 3762520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 142550 |
End bp | 143479 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784817 |
Product | porphobilinogen deaminase |
Protein accession | YP_390382 |
Protein GI | 78484457 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA CTCTCAGAAT CGCAACACGT AAAAGCCCTT TAGCCATGTG GCAAGCCGAA TTTGTCAAAG CAGAGCTTGA GAAACATCAC GAAGGATTAA CGGTAGAGCT GCTGCCGATG TCAACGAAAG GGGACAAAAT TTTAGATGTT CCTTTAGCCA AAATCGGTGG TAAAGGGTTG TTTACCAAAG AGCTTGAAGA TCGCATGCTC GCCGGTGAAG CTGATATTGC GGTTCACTCG ATGAAAGATG TGCCTATGGT GTTACCAGAA GGGTTCGCTT TAGGCGCCAT TTTGGAGCGC CATGAACCGA CAGATGCCTT TGTTTCCAAT GATTATGCTC ATTTTGAAGA GCTGCCACAA GGTGCTGTAC TGGGCACGTC AAGCCTAAGA CGGAAAGCTC AATTGATGGC TGCACGTCCA GATTTGGTGG TGAAAGACTT GCGGGGCAAT GTTGGAACGC GTTTAGGAAA ATTGGATGCC GGTGACTATG ATGCCATCGT GCTGGCAACG TCCGGATTAA AACGGTTGGA ACTGGATGAG CGTATCCGTC ATGAGTTGTC GCCGGAAACC TGTTTACCTG CTGTGTCTCA AGGTACATTG GGCATTGAAT ACTTTGAAAA AGACCCAGAA GTACTAGAGC TTATTCAGGT ATTGAACCAT CGGGATACGG AAATTCGTAC CTTGGCCGAA AGAGCAATGA ACCATCGCTT GGAAGGTGGT TGTCAGGTGC CAATCGGTGT TTATGCTGAA TTAGAAGACG ATCAGATTTA TTTACGCGGA CTGGTCGGTG CTTTAGACGG CTCCGAAATT TTGCGATCTG AAGCCAGAGG ATCGCAAAAA GACCCGGAAA CACTGGGTGT TTATGTCGCT GAGCAATTAT TGGAGCAAGG CGCAGGTGAG ATTTTAAAAG AAGTGTATGA CCAAGCCTGA
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Protein sequence | MKKTLRIATR KSPLAMWQAE FVKAELEKHH EGLTVELLPM STKGDKILDV PLAKIGGKGL FTKELEDRML AGEADIAVHS MKDVPMVLPE GFALGAILER HEPTDAFVSN DYAHFEELPQ GAVLGTSSLR RKAQLMAARP DLVVKDLRGN VGTRLGKLDA GDYDAIVLAT SGLKRLELDE RIRHELSPET CLPAVSQGTL GIEYFEKDPE VLELIQVLNH RDTEIRTLAE RAMNHRLEGG CQVPIGVYAE LEDDQIYLRG LVGALDGSEI LRSEARGSQK DPETLGVYVA EQLLEQGAGE ILKEVYDQA
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