Gene Tcr_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0096 
Symbol 
ID3762230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp123215 
End bp124225 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content48% 
IMG OID637784801 
Producthypothetical protein 
Protein accessionYP_390366 
Protein GI78484441 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGTA GCGCTTCAAT GCGATTGTCT TCAATGTGGG CTTCTGCAAA GAGTTGGTTC 
GATCAGGCCG CCTCCGATTC TTTGACTCCT CAGATTCAGG CGCCTATTCT CTCTGAACAG
CAAATTCATG CACTGGGAGA TGAGGTGTCA CAGATCGTTG CTAAGCCCGT TGCCAACCCA
AAAGCCAGTG ATGCGCGAAA ACAAGGTGAA CAGGCCAGTC GCTATCTTGG TTCGGGCATG
GAATATGAAG AAAGTCGTCG GTATCAACCG GGGGATGAAG TGCGGCGCAT CAACTGGCGT
CTAATGGCAC GAACCGGTCA AGCCCATACC AAATTATTTC AAGAAGAACG TCAAGAAAGC
TGGACACTGC TTTTGGATCA ACGACAGTCG ATGCGGTTTG GCACACGGCA TTATCTTAAA
GTGGTACAAG CCGCAAGAGC CGCCGGGTTT TTTGCCTGGC AGGCGCAGCA ATCCGGGTTG
CCGGTTGAAG GTATTGCGCT CTCTGAACAA ATTCGAAATT CAGCAACTTT TGAAGGCAAT
GGAACGTTTG AGCGATTTAT GGAGTTCGCT TCAGTCGCTT GTCCTCCCTT GGCGGTGATA
CAAGAATCAC GTTTGTATGA TGAGTTATTG GTCTGCCAGC AACGCTTACA ATCCGGCGAT
AGATTGATTA TTTTGAGTGA TTTTAAAGAT CTCGATGATG CGACGTTGCA ACTGTTAGCC
GCATTGCAGG ATAAAATCAT GATAAAGGCC GTATTGATCT ATGACCCTGT TGAAAAGCGG
TTGCCGTCAT TACCTGGTTT GAAGCTGCAG TCTTTAAATG GCGAGTTTGA GGTGTCTCAA
TTATCAGCGC AACAGTCGAA AGCGTATCAA AAATGGTCAG AACAGTATTT TGATCATAAG
ATTCAGCGCT TGAATCAGGT GGGAGTGACC GTCGTGAGTT TGTCTACTGT GGACTCTTTG
CAGGTGTTGA ATGATCAACT CCATGTGGGA GGGGTGTATG CCAGATCCTA G
 
Protein sequence
MMRSASMRLS SMWASAKSWF DQAASDSLTP QIQAPILSEQ QIHALGDEVS QIVAKPVANP 
KASDARKQGE QASRYLGSGM EYEESRRYQP GDEVRRINWR LMARTGQAHT KLFQEERQES
WTLLLDQRQS MRFGTRHYLK VVQAARAAGF FAWQAQQSGL PVEGIALSEQ IRNSATFEGN
GTFERFMEFA SVACPPLAVI QESRLYDELL VCQQRLQSGD RLIILSDFKD LDDATLQLLA
ALQDKIMIKA VLIYDPVEKR LPSLPGLKLQ SLNGEFEVSQ LSAQQSKAYQ KWSEQYFDHK
IQRLNQVGVT VVSLSTVDSL QVLNDQLHVG GVYARS