Gene Tcr_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0094 
Symbol 
ID3762228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp120804 
End bp122063 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID637784799 
Productmajor facilitator transporter 
Protein accessionYP_390364 
Protein GI78484439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000571011 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCATC GATTAAATCC CTCAGAAAAT GCTCTTATTC ATGGTATTTC GGTTAATAAA 
CACCAGTTTT TGTTACAGCT CTTACAAATC TTTTTGGTTG GATTAACCAT CGGGATGATT
CGTGTGGTGG TGCCAGGCTT GGCAGAATCT GAGTTTGGCT TGGCCGATAA AGCCTTTTTT
CTATTGGCTT CTTTTGTGGT GGTCTTCGGA ATCATTAAAG CCGTGATGAA TTTGTTTGCT
GGTAAGCTGA GTGAGCAGTA TGGTCGAAAA TCCGTCCTAA TTTGGGGATG GTTGGTGGCG
CTGCCGGTGC CTTTTATTTT GTTGTATGCT CCGAGTTGGA ACTGGATTAT TTTTGCCACG
GTTTTGCTGG GATTTAACCA GGGACTGGCT TGGTCCATGG CCTTGAACAG TAAATTGGAT
TTAGCCAAAT CGACGCAAAA AGGTCTGGTC AACGGTGTAA ATGAGTTTTC AGGTTACGCT
GCGGTTGGGG TGGCCGGCTT GGTCACCGCC TATTTTGTCG AATGGTTTGG GGCAAAAGAG
GGGCTGTTTA TATTCAGTTT AAGTGTGATT CTGTTAGGGC TGGTTTTAGC CAAATGGTCC
ATTAAAGAAA CCTTGCCTTG GGCGGCGTTA CATCACCAAA TGGCGAGCCA GAATGGCGAA
GTGCATTCGG CAAAATCGTT AACGCAACTT TTTAAAATGG CCAGTTGGGA GAATGACTCC
TTGGTCGCTA TCAACCAGGC AGGATTAATC GAAAAGTTTA CCGATGCGAT TGTTTGGATT
TTCTTGCCGG TTTATTTTCT CTCGCAAGGG CTTTCCTTGA TCGAGGCCGG TGCCATTGTT
GCGATTTACG GGGTGGTTTG GGGGGCAAGC CAACTGGTGA CTGGCCCTTT ATCCGATAAA
ATCGGACGAA AAGGATTGAT CGTTTGGGGT ATGTGGTTGT GTGGTTTGGG CGTATTATCG
ATCCCAATGA CGCAGGGGGT GATCTTATGG TCTATAGAAG CCGCTGTCAT TGGTCTCGGA
ATGGCGATGC TTTACCCAAA TTTAGGGGCA GCCGTGGGAG ACTTTGCTCC GGCCCCTCAT
CGGGCGAGTT TAATTGGTAT TTATCGATTC TGGCGTGACT CCGGCTATGC GTTTGGAGCC
TTGGCAATGG GAATTCTGGC ACAATGGTCG CAAGACCTTT CGACACCCTT TTGGATGGTC
GGTATTGCCA TGCTGCTGTC AGGGGCGTGG GTTCAAGTTA AAATCACCAA TCAACGTTAG
 
Protein sequence
MTHRLNPSEN ALIHGISVNK HQFLLQLLQI FLVGLTIGMI RVVVPGLAES EFGLADKAFF 
LLASFVVVFG IIKAVMNLFA GKLSEQYGRK SVLIWGWLVA LPVPFILLYA PSWNWIIFAT
VLLGFNQGLA WSMALNSKLD LAKSTQKGLV NGVNEFSGYA AVGVAGLVTA YFVEWFGAKE
GLFIFSLSVI LLGLVLAKWS IKETLPWAAL HHQMASQNGE VHSAKSLTQL FKMASWENDS
LVAINQAGLI EKFTDAIVWI FLPVYFLSQG LSLIEAGAIV AIYGVVWGAS QLVTGPLSDK
IGRKGLIVWG MWLCGLGVLS IPMTQGVILW SIEAAVIGLG MAMLYPNLGA AVGDFAPAPH
RASLIGIYRF WRDSGYAFGA LAMGILAQWS QDLSTPFWMV GIAMLLSGAW VQVKITNQR