Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0084 |
Symbol | |
ID | 3762218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 108554 |
End bp | 109333 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637784789 |
Product | SmtA protein |
Protein accession | YP_390354 |
Protein GI | 78484429 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGAGGC AAGATCGAAA TTTTGATAAG TTAGTCGATA AATTTGAGAA AAAGGTCTAT GACACGGTTA AGGGTGAGTG GCGTTTAAAA CTTCTCAAAG AAGATCTAAC CCCCCTGAAA AAAGGAAATA AACTCTCCAT TTGGGATGCT GGCTGCGGCT TTGCTCAGAT CAGTCAGTGG CTAGCTGAAT CAGGTCATCG CTTGACCTTA TGTGATTTAT CCCATCAAAT GTTGTTGCGA GCAAAAGCTA ATTTTGCACA AGCTGATTTG TTTGCCGAGT TTATTGAGGG GCCTGTTCAA GAGGTCGCAA AACAGATAGA ACCACAAGAT TTAGTCCTAT TTCACGCAGT TTTAGAATGG TTAGCTCAAC CTGAGGAAAC TCTAAAAATA GTTACTGAAC AAGTCAAACC AGGCGGTTAT CTTTCATTAC TATTTTACAA CCGAAATTCA GTAGTTATCA ATAACACATT AAAAGGTAAG TGGCGTTTGC CTTTCATTCT TGAAGATGCT TATCTTAATA AGGGTAAAAA ACTCACACCA CCGAATCCGC AGATCCCAGA AGTAGTTTGT CAGTGGCTCC AAGATTGGGG GTTTAAGATT GAAATCCATA CCGGAATCCG CGTGTTCCAT GACTATATGA CGCGTGAAGT TCTTGAACAG AGCGAAATGG AAGACTTGAT GGCTTTGGAA TATCGTTTCT GCCGTGAACC CACTTACCGT AATATGGCGC GTTATATCCA TATTCTTGCC AAGAAAAAAG ATAGTTTCGG TACTTTATGA
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Protein sequence | MVRQDRNFDK LVDKFEKKVY DTVKGEWRLK LLKEDLTPLK KGNKLSIWDA GCGFAQISQW LAESGHRLTL CDLSHQMLLR AKANFAQADL FAEFIEGPVQ EVAKQIEPQD LVLFHAVLEW LAQPEETLKI VTEQVKPGGY LSLLFYNRNS VVINNTLKGK WRLPFILEDA YLNKGKKLTP PNPQIPEVVC QWLQDWGFKI EIHTGIRVFH DYMTREVLEQ SEMEDLMALE YRFCREPTYR NMARYIHILA KKKDSFGTL
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