Gene Tcr_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0078 
Symbol 
ID3761463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp99789 
End bp100787 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content46% 
IMG OID637784784 
Productmethyltransferase, putative 
Protein accessionYP_390349 
Protein GI78484424 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR00452] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0228138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACATT ATCACCAACA CTATTCTTCT TTTTGGCCCA AACTGGAAGA AGCTCGCCTC 
GGACACTGGC AAAATGCACT AGAAGCTGCT TTAGAGACTG CTTTGGATCC GGATGCCAAT
GGCAACCTGC CAAAATGGCT CCCGGCATTA GAAACTGTAA TGGCTTTTCC CTCTTCAGAT
TCGGCTGAAC TGAGTCAATC CGCTATTAAA GCGCACTCTC AACCGTTTTC GGAGGATGAT
AAGGAAAAAC TGACACAAGC GCTGAAAGCC TTTATGCCTT GGCGAAAAGG ACCCTTTGAA
ATTGAAGGTA TTTACATTGA CACCGAGTGG CATTCTGATT GGAAATGGGA TCGAGTCTCA
CCGCACTTAA GCTCATTAAA AGGCCGAAAA GTACTCGATA TTGGTTGTGG CAGTGGCTAC
CATCTCTGGC GCATGCTGGG AGACGGTGCC GAGCTTGCTT TAGGCGTTGA TCCCGGGTTG
CTCTTTATGA CCCAATTCTT AGCCATTAAA CATTTTGTCG GAGAATCCTT GCCGGCCTAC
TTTCTCCCAC TGACTTTGGA GCAATTGCCA AAAACCCAAC CATCAGAAGT CTTTGACACG
GTTTTTTCAA TGGGTGTGTT GTATCACCGT CGCTCTCCAA TTGACCATAT CATGGACTTA
AAACGTTACT TGAAGCCGGG TGGCGAATTG GTTTTGGAAA CATTGGTGAT ACCTGATGCC
CAAGGCCAAC TACTGGTGCC GAAAGAACGT TACGCCCAAA TGAATAATGT TTGGTTTATA
CCCTCTGTCC AAGAGCTTGG ACATTGGTTA GAAAAGTGCG GGTTCAAAAA TGTTCGCTGT
GTCGATTTGG ATCAAACTTC TGTCAAGGAG CAACGTACCA CGGAATGGAT GAACTGGAAT
TCCTTAGCCG ACTTCCTTGA CCCAAACGAC TCCAATAAAA CCATTGAAGG TTACTCCGCT
CCATTGAGAG CCGTGATGAT TGCCGATAAG CCTTGTTAA
 
Protein sequence
MKHYHQHYSS FWPKLEEARL GHWQNALEAA LETALDPDAN GNLPKWLPAL ETVMAFPSSD 
SAELSQSAIK AHSQPFSEDD KEKLTQALKA FMPWRKGPFE IEGIYIDTEW HSDWKWDRVS
PHLSSLKGRK VLDIGCGSGY HLWRMLGDGA ELALGVDPGL LFMTQFLAIK HFVGESLPAY
FLPLTLEQLP KTQPSEVFDT VFSMGVLYHR RSPIDHIMDL KRYLKPGGEL VLETLVIPDA
QGQLLVPKER YAQMNNVWFI PSVQELGHWL EKCGFKNVRC VDLDQTSVKE QRTTEWMNWN
SLADFLDPND SNKTIEGYSA PLRAVMIADK PC