Gene Tcr_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0075 
Symbol 
ID3761460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp94732 
End bp95646 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content45% 
IMG OID637784781 
Producthypothetical protein 
Protein accessionYP_390346 
Protein GI78484421 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.193793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATC ACGCTGACAT TTATTCACAA CTGGATGAAC TCATTGGGTT GAGGTTTCAC 
GTGAAACAAC ATCATCTGGT GTCACAACAG AAACTGATTT CAGAAAAAGG CGGTTACCAT
CAAGCGGTGC GAAAAGGGCG AGGCATGGAA TTCAACGAAG TTCGTGAATA CGCGGCCGGA
GATGATGTAC GCCATATTGA TTGGAAAGTA AGTGCCCGCA CACAAACCAC CCACACCAAA
GTTTTTACCG AAGAACTGGA AAAGCCCGTC ATTTGCTTGG TGGAACAAAC GCCTCCGTTG
TTTTTTGGTT CGAAAATCCG TTTCAAAAGC AGCCAGGCAC TCAATGTCAT GGCTCTAATT
GGTTGGATCA GCTTACAACA AGGCGATCGT TTTGGTGGGT TTGTATTCAA TCATTTGAAC
CAACACTGGG TGGAGCCGCG CCATAACGGA AAAACCATGA TGCAATTGTT GCACCAAAGC
CTGGCTCTAC AGCAGCAACT TAAATCGCCG GCGGCCTTGT CACAGGATTT ATGGCTATTG
CATTTAACCC GATTACAAAA ACACTTACGC CCCGGCAGCC GAGTGTTTTT AATCGGTGAT
TTTTTGAACA GCAGCGAGGC GTTTATTAAA AAACTGGCTC AGTTAAAAAA ACATGCCGAC
ATCAATTTGA TTCACATCTA TGACCCATTA GAAAAAACAC TCCCTTCCAG TGGCACCTTA
AAAATCACTG ACGGACAAGC TGAAATGGGG TTGAACACAC TGGATACCGC TTTTAAAAAT
GCCTATCAGG CCACTTACCA GCACGCTTGG AAAGTCTTAA AACACCAACT GCTGCCTTGG
CATTTTCCCC TCATGGAAGT CGCCACACCG CAAGATCCGC TTCAAGCACT CATATCACAA
GGAGTGGTTC GATAA
 
Protein sequence
MSDHADIYSQ LDELIGLRFH VKQHHLVSQQ KLISEKGGYH QAVRKGRGME FNEVREYAAG 
DDVRHIDWKV SARTQTTHTK VFTEELEKPV ICLVEQTPPL FFGSKIRFKS SQALNVMALI
GWISLQQGDR FGGFVFNHLN QHWVEPRHNG KTMMQLLHQS LALQQQLKSP AALSQDLWLL
HLTRLQKHLR PGSRVFLIGD FLNSSEAFIK KLAQLKKHAD INLIHIYDPL EKTLPSSGTL
KITDGQAEMG LNTLDTAFKN AYQATYQHAW KVLKHQLLPW HFPLMEVATP QDPLQALISQ
GVVR