Gene Tcr_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0060 
Symbol 
ID3762214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp71821 
End bp72318 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content38% 
IMG OID637784766 
Productcation antiporter 
Protein accessionYP_390331 
Protein GI78484406 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA AAAAAATCTT ACCTCATCCC ATCTTAAGTT TATTTTTATG GGGAATTTGG 
TTATTACTGA ACAACAATTT TAGCGCAGGC CATATTGTGC TTGGGTTTAT CCTGGCACTG
ATTATTCCGA TGTTCACTTC CAGCTTCTGG CCGGAAAAAG TGTGTTTAAA ACACCCTATA
ACTTTGCTTA AATTTCTTGG CATCGTATTA TGGGATATCT TGGTGGCGAA TGTTACGGTC
GCTAAATTGA TTTTAGGAAA AACGGCTCAT CTTCAACCGG GCTTTTTAAC CATTGAATTA
GACATTACGC ATCCTTTAGG AATTAGTTTT TTGGCCAATA CCATTTCATT AACGCCAGGC
ACCGTTTCAT GTGATTTATC GGAAGATCGA AAGCAATTAC TTGTTCACGC TTTGCATATA
GAAAATGCGG CCGAAACCAT AGAAGAAATA AAACAACGCT ATGAGCGTCC ATTAATGGAG
GTATTTCCAT CATGTTAG
 
Protein sequence
MNIKKILPHP ILSLFLWGIW LLLNNNFSAG HIVLGFILAL IIPMFTSSFW PEKVCLKHPI 
TLLKFLGIVL WDILVANVTV AKLILGKTAH LQPGFLTIEL DITHPLGISF LANTISLTPG
TVSCDLSEDR KQLLVHALHI ENAAETIEEI KQRYERPLME VFPSC