| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0043 |
|---|
| Symbol | |
|---|
| ID | 3760369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 51696 |
|---|
| End bp | 52676 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637784749 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_390314 |
|---|
| Protein GI | 78484389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.848383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAT ATCGCCGTTT ATTAAGTCGT AATTTTAACC TTTTCTTAGG ACGGTTTGGG
ATGTCTGTTT ATACTGTTGT GAATCAAGCG GAGTTGGAAG CCTTTTTAGC GGATTTTGAT
CAAGGCTCTC TGGTCGCATT TGAAGGCATT AGCGCAGGCA TTGAAAATAC CAATTATTTT
GTCGACACCA CCGCTGGACG GTTTGTTCTG ACCATTTTTG AACATCATGA TTTTGATGAA
TTACCTTATT TTCTCGACAT TATGGCGTTT ATGGCCGAGC ATCAAATTCC AACCGCCCAT
CCAAAACCGA CGTTAAAAGG TTCTTATTTG AAAGAACTGA AAGGTAAGCC TGCAGCACTG
GTTGAACGTT TAACCGGTTC AGGCGTGGAC CATCCGACGC AAACACAATG TGAAGTCATG
GCCGAAAATC TGGCCAAATT CCATTTGGCA GGTCAAGATT ATGACCAATT TCGAGCCAAT
GATCGTGACT TGCACTGGAT GAAAAACACG TTTCAAGAAA TTAAACGTTT TTTGCCAGAA
GACGAAACCG CGTTAATCGA ATCGGAAATC CATTATCAAA ACAACATTGA TTGGTCACAA
CTCCCAAACA GTGTCATCCA TGCCGATTTA TTCTGTGATA ACGCCTTATT TAATGGGGAT
GAGTTGTCCG GCATCATTGA TCTTTATTAC GCTTGTAACT CTGCCATGCT CTACGATTTG
GCGGTGATGG TGAATGATTG GTGTCGTTTA CCGGACTTCA GTCTCAGCAC AGAAAAAGTG
CATGCGGTGT TAAAGGCGTA TCAGGCAGTT CGCACTCTGA CGGAGCAAGA ACAGCAATCC
TGGAAAGCAG CTCTTAGAAT GGGCGCATTA CGTTTCTTCT TATCGCGTTT GAAAGATAAG
CATATGCCGA GAGAAGGCGA AATGACGCAA ATCAAAGACC CAAATGTCTT CAAAAACCTA
TTGATATCCC ACCGAAAGTA A
|
|---|
| Protein sequence | MLKYRRLLSR NFNLFLGRFG MSVYTVVNQA ELEAFLADFD QGSLVAFEGI SAGIENTNYF
VDTTAGRFVL TIFEHHDFDE LPYFLDIMAF MAEHQIPTAH PKPTLKGSYL KELKGKPAAL
VERLTGSGVD HPTQTQCEVM AENLAKFHLA GQDYDQFRAN DRDLHWMKNT FQEIKRFLPE
DETALIESEI HYQNNIDWSQ LPNSVIHADL FCDNALFNGD ELSGIIDLYY ACNSAMLYDL
AVMVNDWCRL PDFSLSTEKV HAVLKAYQAV RTLTEQEQQS WKAALRMGAL RFFLSRLKDK
HMPREGEMTQ IKDPNVFKNL LISHRK
|
|---|
| |