Gene Tcr_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0042 
Symbol 
ID3760368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp50787 
End bp51536 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content42% 
IMG OID637784748 
Producthypothetical protein 
Protein accessionYP_390313 
Protein GI78484388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACT TACTGAGGAA TCTTTGGTTT CGTGATCCCA AAGAAGAAAC AACGTTTATC 
AATGATAATG CCGTGAAAAT TCGTGCCGGT ATTTTATTGA TTATTCCGAT TTATATGACG 
TTTACCTTAA TTGACGTAGT GTTTGGACCA ACGTGGAATG TCCTGCAAAA CACCACTATG 
ATTGATACAC TGGAAACCGA CTGGAACTGG CACACCATTT ATCAAGTGCA GGCCACCCAA 
CGCGCTTATG ATTACACTAT TCAAACCTGG GTATTGTTTT ACGGTTTGTT TGAAATGATT 
GCCGGTATGT TCGTGACCAC TTCTCGTTTG TCTCCAACCA TTTATATCGC AACTTTGCTC 
GCTAAAAAAG ATAAGCCGAA TTGGAAGCCA TTGGTACCGA AACGATTTGC TTGGACGATT 
GGTGCCACCT TTATTACGGT GTGTTTGATC TTCTTCAACC CGGACGTGTT TGCAAACTGG 
GTCAACACCT TATTTGGCAG TAAACTGCTG CCCACAACTG AAAATTATAT GCCGGACTGG 
ATTCCGTTAG TGTTGGTATG GATTTGTTTA GGTTTTATGT GGCTGGAAGC AATTCTAGGT 
TTTTGTGTCG GTTGCCAAGT GCATGCGCTG TTGGTGAAGC TCGGCATTTT CAAAGAAGAG 
TGTTTGGAGT GTAACAATAT CGATTGGGAA GAAATCGCCC GTCGTAATGA AGAACGCAAA 
GCCAAAGAAG CGGCTGAAAA TAAGTCCTAA
 
Protein sequence
MQNLLRNLWF RDPKEETTFI NDNAVKIRAG ILLIIPIYMT FTLIDVVFGP TWNVLQNTTM 
IDTLETDWNW HTIYQVQATQ RAYDYTIQTW VLFYGLFEMI AGMFVTTSRL SPTIYIATLL 
AKKDKPNWKP LVPKRFAWTI GATFITVCLI FFNPDVFANW VNTLFGSKLL PTTENYMPDW 
IPLVLVWICL GFMWLEAILG FCVGCQVHAL LVKLGIFKEE CLECNNIDWE EIARRNEERK 
AKEAAENKS