Gene Tcr_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0032 
Symbol 
ID3760358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp39663 
End bp40460 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID637784738 
ProductABC transporter related 
Protein accessionYP_390303 
Protein GI78484378 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAC AAGGTTCCAA TGTTTGGATT TCAGAATTAT CCCATACATT TAAAAAACAG 
ACGAAACCGA CTTTAAAGAA TATCAATCTG ACCATTCCAA AAGGTCAACT CACCGCTTTA
ATCGGGCGCA GTGGCTGTGG TAAGTCAACC CTGTTACAAA TGATTGCCGG CTTGATGATT
CCATCTGATG GCGCCATTCG TATTAACGCT CACACCGTCA CTAAACCGAG CGCAAAGTGG
AACATGATGT TCCAGAAGCC TTCATTGTAC CCATGGATGA CGGTTCGTGA AAATGCGGCA
TTAGGATTGG TCTTTTCAGG CACTTACAAA CAGAAAAAAA ACCGTGTGGA AGACTTATTG
GACATGGTGG GTTTAACCGA GCACAAAGAC AAAAATGTTC AACAATTGTC TGGTGGACAA
CAACAGCGAG TGGCTTTAGC TCGTTCTCTG GCAACCGAAC CGGAAATTTT ATTATTAGAT
GAACCTTTTT CAGCCTTAGA TGCCTTTACA CGAACGCAGT TACAAAATGA AGTTGCGGAA
ATCTGCCATA ACCAAGGCAT CACTATGATT ATGGTTACTC ATGATATTGA TGAAGCCATC
GCAATGGCTG ACAAAGTCAT CATTATGAGC CAAAACCCAG GTGAGATCGT AGGAGAACAA
GATGTAAATC TTAGTTACCC TCGTGATCGT TCATTGGATG AATTTAACAC CCTGAAAGAA
AACCTATTTA ACGAATTTGA AAAAATTGAC TTGGCCAAAC AAAGCAGTCT CGCCGAATCG
ACCCCAAACG CTCAATAA
 
Protein sequence
MTAQGSNVWI SELSHTFKKQ TKPTLKNINL TIPKGQLTAL IGRSGCGKST LLQMIAGLMI 
PSDGAIRINA HTVTKPSAKW NMMFQKPSLY PWMTVRENAA LGLVFSGTYK QKKNRVEDLL
DMVGLTEHKD KNVQQLSGGQ QQRVALARSL ATEPEILLLD EPFSALDAFT RTQLQNEVAE
ICHNQGITMI MVTHDIDEAI AMADKVIIMS QNPGEIVGEQ DVNLSYPRDR SLDEFNTLKE
NLFNEFEKID LAKQSSLAES TPNAQ