Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0032 |
Symbol | |
ID | 3760358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 39663 |
End bp | 40460 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637784738 |
Product | ABC transporter related |
Protein accession | YP_390303 |
Protein GI | 78484378 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAC AAGGTTCCAA TGTTTGGATT TCAGAATTAT CCCATACATT TAAAAAACAG ACGAAACCGA CTTTAAAGAA TATCAATCTG ACCATTCCAA AAGGTCAACT CACCGCTTTA ATCGGGCGCA GTGGCTGTGG TAAGTCAACC CTGTTACAAA TGATTGCCGG CTTGATGATT CCATCTGATG GCGCCATTCG TATTAACGCT CACACCGTCA CTAAACCGAG CGCAAAGTGG AACATGATGT TCCAGAAGCC TTCATTGTAC CCATGGATGA CGGTTCGTGA AAATGCGGCA TTAGGATTGG TCTTTTCAGG CACTTACAAA CAGAAAAAAA ACCGTGTGGA AGACTTATTG GACATGGTGG GTTTAACCGA GCACAAAGAC AAAAATGTTC AACAATTGTC TGGTGGACAA CAACAGCGAG TGGCTTTAGC TCGTTCTCTG GCAACCGAAC CGGAAATTTT ATTATTAGAT GAACCTTTTT CAGCCTTAGA TGCCTTTACA CGAACGCAGT TACAAAATGA AGTTGCGGAA ATCTGCCATA ACCAAGGCAT CACTATGATT ATGGTTACTC ATGATATTGA TGAAGCCATC GCAATGGCTG ACAAAGTCAT CATTATGAGC CAAAACCCAG GTGAGATCGT AGGAGAACAA GATGTAAATC TTAGTTACCC TCGTGATCGT TCATTGGATG AATTTAACAC CCTGAAAGAA AACCTATTTA ACGAATTTGA AAAAATTGAC TTGGCCAAAC AAAGCAGTCT CGCCGAATCG ACCCCAAACG CTCAATAA
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Protein sequence | MTAQGSNVWI SELSHTFKKQ TKPTLKNINL TIPKGQLTAL IGRSGCGKST LLQMIAGLMI PSDGAIRINA HTVTKPSAKW NMMFQKPSLY PWMTVRENAA LGLVFSGTYK QKKNRVEDLL DMVGLTEHKD KNVQQLSGGQ QQRVALARSL ATEPEILLLD EPFSALDAFT RTQLQNEVAE ICHNQGITMI MVTHDIDEAI AMADKVIIMS QNPGEIVGEQ DVNLSYPRDR SLDEFNTLKE NLFNEFEKID LAKQSSLAES TPNAQ
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