Gene Tcr_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0029 
Symbol 
ID3760355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp35332 
End bp36684 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content45% 
IMG OID637784735 
ProductSodium/sulphate symporter 
Protein accessionYP_390300 
Protein GI78484375 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACA CAAAGCAGAC CACCACTGGC TTGTTGATCG CTATCTTAGC GGGAATCATC 
GTGTTAAGTC TTCTAAGCAC TTTACTGCCT TTCCAACAAG CGGCGTTGCT CGGGCTGGTC
ACTTTCATGG TCATTTTGTG GAGTAATGAA ACGCTCCCAC TAGGTTGGGT GGCTTTATTT
CCGATTGTCG CCTTTCCCAT GTTCGGCATT GCCGACACAA ATACCGTGGC ACCCAATTAT
GCCAAGTCAA TTATCTTCTT GTTTTTGGGT GGCTTTATGC TAGCCATTGC CGTTGAAAAA
ACCGGATTAC ACAAAGTTAT TTCCAACAAA ATGCTGGCCA TTTTTCCGAA TACCGCACGC
GGTATGATTT TCGCCTTAGC GATCACCTCC GGCACTTTAA GCGCTTTTTT ATCCAACACC
ACCACCACTT TATTGCTCAT TCCGCTGGCA CTGTTCTTAT CGGAAGACTT AAAACTCAAA
GTTCGGTTTG CTTTGGCCAT TGCTTACGGT GCCAGTATTG GCGGCATTAT CACACCAATC
GGCACGCCCC CGAATTTGAT TTTATTTGGC ATTTTTGAAG AACACCAAAT CGCCAGTATT
CCATTTATAC AATGGATTAC ATTAGTACTG CCCTTGGCAT TGATGATGTT TTTTGTGGTT
GGCTGGGTGC TCTCATTGGG AACAGATAAT AAACTCATTC CGACCCACGA TGACACCAAA
AGCCTATCCC CTAACCAGAA AAAAGTCAGT GTTGCTTTAA TCGCATTAAT CAGTTTACTG
CTGATTAATT CTCCAATTGA GCCCTATTAC AGTGGGTTGG GGCTAAATGA AAAAGGCATT
TTATTGGGGT TTGGGTTAAT GATGTTTTTA CCCCCCTTTA ATATCCTAAA CTGGGGTGAT
TCACACAAAA TTCCTTATGA AATCATCTTT TTATTCGGAG CCGGCTTCGC CATTGCCAAT
GCGTTTACCG ATACAGGGTT AGCCGATCAA CTAGCGACCT GGTTACAAGC GGCCACCAAC
TTACCGCCAT TACTTCTTTT AGTCCTGATT GCCAGCATCG TCACGTTCTC AACCGAGATC
ACCAGTAACA CCGCCTTGAT TTCTATGGTG CTCCCGGTGA TTTATGCCGT TACCGAACAA
AATGGACTGG ATAGCCGACT CTTTATGATG GTTGCCACCA TTTGTGCGAG CTATGCCTTT
ATGTTGCCCA TTGCCACGCC TCCTAACGCC ATTGCAATGA GTAGCGGTGC CGTCACCGTT
AAAATCATGG CACGCTATGG CATTGTCTTT AACTTTATAG GCATTCTGCT GGTAACGCTA
ACAGCCACTT TATACTGGCA AGCGTTTTTA TAA
 
Protein sequence
MTNTKQTTTG LLIAILAGII VLSLLSTLLP FQQAALLGLV TFMVILWSNE TLPLGWVALF 
PIVAFPMFGI ADTNTVAPNY AKSIIFLFLG GFMLAIAVEK TGLHKVISNK MLAIFPNTAR
GMIFALAITS GTLSAFLSNT TTTLLLIPLA LFLSEDLKLK VRFALAIAYG ASIGGIITPI
GTPPNLILFG IFEEHQIASI PFIQWITLVL PLALMMFFVV GWVLSLGTDN KLIPTHDDTK
SLSPNQKKVS VALIALISLL LINSPIEPYY SGLGLNEKGI LLGFGLMMFL PPFNILNWGD
SHKIPYEIIF LFGAGFAIAN AFTDTGLADQ LATWLQAATN LPPLLLLVLI ASIVTFSTEI
TSNTALISMV LPVIYAVTEQ NGLDSRLFMM VATICASYAF MLPIATPPNA IAMSSGAVTV
KIMARYGIVF NFIGILLVTL TATLYWQAFL