Gene Tcr_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0025 
Symbol 
ID3760351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp29245 
End bp29964 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content51% 
IMG OID637784731 
Producthypothetical protein 
Protein accessionYP_390296 
Protein GI78484371 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACT TTACTGAAGA AATGCTGGAT ACCCATTTAA CCGAAGAGCA TTTCAGTCAC 
CGAATGGGGT GGTTGAGAGC CGCTGTATTA GGCGCCAATG ATGGGATTAT TTCTGTCGTC 
AGTTTACTAG TCGGGGTCAT TGCTTCCGGA GCTGAGAAAG ATGCCATTCT ACTGGTAGCC 
GTGGCGGCTC TTGTTGCAGG GGCACTTTCT ATGGCTGCCG GAGAATATGT GTCTGTAAGC 
TCGCAATCGG ATACGGAAAA AGCCGACCTT GAAAAAGAAA AAATAGCCCT TGAAGAAGAT 
TGGGAAACCG AACACGCCGA GCTGGCTTTG ATTTATCGTC AACGCGGTGT CAGTGAAGCA 
ACAGCCAACC AAGTCGCCAC CGAACTTATG GAGCATGATG CACTCGGTGC ACACGCCAGA 
GACGAGCTGG GCTTATCTGA AATTCATACC GCTCGTCCTT TGCAAGCGGC CTTTGCCTCA 
GCCGCCTCTT TTGTATCAGG TGCGGCTGTA CCTGTCATTC TGGTGGCCAT TCTGCCCATG 
GAAAACTTAG GGATTATTAT TGCGTCCAGC TCACTGGCAC TGCTGGCTAT ATTAGGGGCG 
GTTGCAGCCA AAACCGGCGG CGCGAATATG CTAAAAGGGG CACTAAGAAT GTCTATCTGG 
GGCTTTTTAG CCATGGCATT AACCACTTAT GTAGGACTTG TCTTTGGGGC AATGGGCTAG
 
Protein sequence
MAHFTEEMLD THLTEEHFSH RMGWLRAAVL GANDGIISVV SLLVGVIASG AEKDAILLVA 
VAALVAGALS MAAGEYVSVS SQSDTEKADL EKEKIALEED WETEHAELAL IYRQRGVSEA 
TANQVATELM EHDALGAHAR DELGLSEIHT ARPLQAAFAS AASFVSGAAV PVILVAILPM 
ENLGIIIASS SLALLAILGA VAAKTGGANM LKGALRMSIW GFLAMALTTY VGLVFGAMG