| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0024 |
|---|
| Symbol | |
|---|
| ID | 3760350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 27566 |
|---|
| End bp | 28963 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637784730 |
|---|
| Product | beta-lactamase-like |
|---|
| Protein accession | YP_390295 |
|---|
| Protein GI | 78484370 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGA TTCAATCCTT TGGGGCAGCA GAAACCGTGA CAGGATCTTG TCACTTTTTA
CAACTGAAAC AGGGGCCTCA AATCCTGGTC GACTGTGGTA TGTTTCAAGG CTATGCTGAA
AAACGAGCTT ATGAAGACTT TGGATTCGAT CCTAAAAAAG TCGATGTTCT GCTGATTACC
CATGCTCATT TGGATCATGT AGGACGCATC CCAAAGCTGG TTAAAGAAGG CTTTAAAGGC
CGTATTATCA GCTTAAGAGC CACCATAGAT ATCATGGAAG TGATTCTAAT GGACAGCGCG
AAGATCATGC ATGAAGACTA CAAAACGGCG TTCAAAAAAG CACAGCGCCG TGGAGAGGAA
GATAAAGTCA CTCCGCCACT GTATACCCTT GAGGATGTTC AATCGGTCTT TGATCTAGAC
ATTCAGTATG CCGAGTATGA CCAACCGACG ACCATCAACA AAGACGTAAA AGCCACTTTT
AGAAATGCCG GACATATTTT AGGGTCGGCA ACCGTTCAAA TTGATTTTAA AGAAGAAGAA
CAAAGCAAAA CGGTTGTTTT CTCAGGCGAC TTAGGTAATG ACGAGGATGT GATCATGCCG
CCGCCAGAAT CGGTTCAAAA CGCGGATGCG CTTTACATTG AATCCACTTA TGGCGATCGA
AATCATCGTG CTTTAAAAGG CAGTATTCAA GAATTTAAAG AAGCCGTTAT CAACACCTTA
ATGAATCAGG GTAATATTTT GATTCCTTCT TTTGCGGTAG AGCGCTCACA AGAGATCTTA
CTGTTGCTCA AACAAATGTA TTACGATGAT GAACTCCCGC CGTGTAAAAT ATTTTTAGAC
TCGCCTATGG CCATCCGAGC CACCGATATT TATAACCAAT ACCATGATGA ACTCAATGAA
ACTGCAAATG ACTTCATCAG GAAAGATGGA TCCGTTTTCG ATTTCCCGCC GTTGGAATAT
ACGTTAAAAG GATCGGATTC GATGAAAATT AATGATGAAG AAAGTGGTTG TATCATCATT
GCTGGCAGTG GCATGTGCAG TGGAGGCCGA ATTCTTCATC ACTTTAAACA CCGGTTATGG
AGTGCCCGTA ACAGTGTGAT TTTTGTTGGT TATCAAGCAC AGGGCACACT CGGTCGTTTA
ATGGTGGATG GCGCCGAGGA AATTCGTATT TACCGCGAAA CCATTAAAGT GCGCGCGAAA
ATGTACATGA TTAATGGTTT TTCCGCACAT GCAGACCAAA CCGAACTCTT GAACTGGATT
GGAAATTTTA AAAAACTCGA CAAAGTGTTC TTGATTCACG GTGAACGCGA CAAACAAGAG
ATTTTTAAAA CGGCCATTGA AGACCGATTC CATAAAACCG TTCACATTGT TGAGTACGCA
GAAGAAGTCT GGATTTAA
|
|---|
| Protein sequence | MTPIQSFGAA ETVTGSCHFL QLKQGPQILV DCGMFQGYAE KRAYEDFGFD PKKVDVLLIT
HAHLDHVGRI PKLVKEGFKG RIISLRATID IMEVILMDSA KIMHEDYKTA FKKAQRRGEE
DKVTPPLYTL EDVQSVFDLD IQYAEYDQPT TINKDVKATF RNAGHILGSA TVQIDFKEEE
QSKTVVFSGD LGNDEDVIMP PPESVQNADA LYIESTYGDR NHRALKGSIQ EFKEAVINTL
MNQGNILIPS FAVERSQEIL LLLKQMYYDD ELPPCKIFLD SPMAIRATDI YNQYHDELNE
TANDFIRKDG SVFDFPPLEY TLKGSDSMKI NDEESGCIII AGSGMCSGGR ILHHFKHRLW
SARNSVIFVG YQAQGTLGRL MVDGAEEIRI YRETIKVRAK MYMINGFSAH ADQTELLNWI
GNFKKLDKVF LIHGERDKQE IFKTAIEDRF HKTVHIVEYA EEVWI
|
|---|
| |