Gene Tcr_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0023 
Symbol 
ID3760388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp26823 
End bp27452 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID637784729 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_390294 
Protein GI78484369 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTCG ATACATTTAT TTCTTTTACC TTGGTGATGT TCTTACTGGC GCTGTCTCCG 
GGCCCAGATA ATCTTTATGT TTTGATGCAA TCGGCTCTTT ACCGGCCCAT GGCCGGTATT 
TGGGTAATTC TTGGCTTATG TACGGGATTA ATCGCTCATA CACTGGCCGC GGCATTTGGT 
ATTACCATCC TCTTCCAAAC CTCTGAAATC GCCTTCACAT TGTTAAAATT ATTGGGCGCA 
GGCTATCTGC TCTTTCTGGC GTGGAAAAGC TATCAGGCCG GTGCGCTTCA TCTAAAAAAT 
AACGCTGTCA GTGCCTTGTC TGCATCTCAA TTGTATCAAC GTGGCGTTTG GATGAATCTG 
ACCAACCCGA AAGTTTTTAT TTTCTTTCTA GCGTTATTGC CACAGTTCAT TGACACAAAC 
GCCAGCTCAG TCGCCCAGCA AATGTTCATG CTAGGCGGCA TCGCTATTCT GGTCACGCTC 
ATAGTATTCA GCGGACTTGC CGTTTTGGCC GGATTTGCAA AAAACTGGAT TCAATCTGAC 
AAGAAACAGC GTGTCTTACA TCAAATAGCA GCAGTGGTTC TGGTGCTCAT TGCACTCAAA 
CTCTTAATCA GCCTGCCATA TGGTCTTTAA
 
Protein sequence
MPLDTFISFT LVMFLLALSP GPDNLYVLMQ SALYRPMAGI WVILGLCTGL IAHTLAAAFG 
ITILFQTSEI AFTLLKLLGA GYLLFLAWKS YQAGALHLKN NAVSALSASQ LYQRGVWMNL 
TNPKVFIFFL ALLPQFIDTN ASSVAQQMFM LGGIAILVTL IVFSGLAVLA GFAKNWIQSD 
KKQRVLHQIA AVVLVLIALK LLISLPYGL