| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3776 |
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| Symbol | |
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| ID | 3758764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 3718647 |
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| End bp | 3720098 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637784698 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_390263 |
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| Protein GI | 78358814 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGAC AGCCGCATGG CGGAGAGGGA AATGCTATGA AAACAGCTGC TGCGGTAACG
GAAAAAGGGC TGAGGCGTTT ACGCGCGGTG TCTGCGGCAG GTGCTGCCTT GTGTCTGCGC
ATCGTTGTGG CGGTGATGTT TGTCTGTGTC GCGGCAGCGG GCAGCAGGGC AGAACATGGC
CCGTTGCCTG ATTCGCCCAG GGTCACTCCT GTTGTGCGTG CTGTGCATGC CGTGGCTCCT
GCCGTGGTCA ATATAACCAC GGCCCGTATG GCTCAGGGGG CGGAACTGCC CGGACCCTTT
GCGGAATCAC CGCTGCTGCG CGAGCTGTTA CGTCTGCCCC AGAGGCAGCA GCCCATGCAG
CGTCACAGTC TGGGCTCCGG CGTAATCATA GATGGTTCCA GAGGCCTTGT CCTGACCAAT
GCCCATGTTA TTTCGGGCGC CACGACCATC CGTGCACGGC TGCTTGACGG GCGCGAATTT
GAAGCCGACC TGCTGGGTGC CGCACCGGAT TTTGATATTG CCGTACTGCG CCTGCAGGCT
GCGCAATCGC TGCCGCAGGT GCCTATGGCT GATTCTTCAG ACATGATGCC CGGCGAAACA
GTCATCGCCA TAGGGAATCC GTTCGGATTC GGACATACGG TGACCACCGG AGTGGTGTCT
GCGCTGCAGC GTTCCATTCA GACAAGGCAG GGCGTGTTTA CATATCTCAT CCAGACCGAT
GCCGCAATCA ATCCGGGAAA CAGCGGAGGG CCGCTTATCA ATATAGCCGG AGAGCTTGTG
GGAGTGAACA CCGCCATACA GGCAAGTGCC GAGGGCATAG GTTTTGCCAT TCCGGTCAAC
AAAGCCCGCA GGGTGGTGGA TGAATTGCTG AGTTCCGGCC GGGTACGGCC GGTGTGGCTG
GGGGTGGAAG GGCAGGATAT TGACCAGCGC ACCGGAGCAT GGCTGGGGCT GCGCGGCACC
GGCGGTATGC TGGTGACCCG CGTGTACGCG GACACTCCCG CGCAAAAAGC CGGTATCCAG
CCCGGTGATG TCATTCTGCG GATGGAAAAT GATACGGTGC AGGATAAGGA TCATTACCTG
CAGCTACTGA GAAACCATAC ACGCGGTCGT CAGCTGGGGC TGCAGATATT CCGGCAGGGG
GAATTACGCC GCACGGCAGT GGTTCCTGTG GCGCTGGGGG CGCAGGATGC GCTTTCCATG
GCGGCCATGC GCTGGGGCAT GCGCGTGCGT GATGCCCGCG GGCAGGGTGT GGTTATCGAA
TCAGTGCGTC CGGACAGCCC TGCCGGCCGT CTGGGGCTGC AAGCCGGTGA TGCCATTCTG
CAGGTGGGCG GTCTGCGCAC GGGATCGCTT CAGGACTTTG CCGAGGCCTT TGTCAGGCAC
CGGCTTTCCG GTGCTGTTCT GCTGGTGGCG GCACGCGGCG GAAGAGCCGC CTATGTACGC
ATGATATTGT AA
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| Protein sequence | MARQPHGGEG NAMKTAAAVT EKGLRRLRAV SAAGAALCLR IVVAVMFVCV AAAGSRAEHG
PLPDSPRVTP VVRAVHAVAP AVVNITTARM AQGAELPGPF AESPLLRELL RLPQRQQPMQ
RHSLGSGVII DGSRGLVLTN AHVISGATTI RARLLDGREF EADLLGAAPD FDIAVLRLQA
AQSLPQVPMA DSSDMMPGET VIAIGNPFGF GHTVTTGVVS ALQRSIQTRQ GVFTYLIQTD
AAINPGNSGG PLINIAGELV GVNTAIQASA EGIGFAIPVN KARRVVDELL SSGRVRPVWL
GVEGQDIDQR TGAWLGLRGT GGMLVTRVYA DTPAQKAGIQ PGDVILRMEN DTVQDKDHYL
QLLRNHTRGR QLGLQIFRQG ELRRTAVVPV ALGAQDALSM AAMRWGMRVR DARGQGVVIE
SVRPDSPAGR LGLQAGDAIL QVGGLRTGSL QDFAEAFVRH RLSGAVLLVA ARGGRAAYVR
MIL
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