| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3657 |
|---|
| Symbol | |
|---|
| ID | 3758644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3620449 |
|---|
| End bp | 3621720 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637784579 |
|---|
| Product | sugar ABC transporter, substrate-binding protein |
|---|
| Protein accession | YP_390145 |
|---|
| Protein GI | 78358696 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAT TCCTGGCAAA AGCGGCCGTT GCGGCCGCCG CATTCTGCCT GATGATCACG
GCGCCCGCCA TGGCGGCGGC GCAGGACAAG CTTGGCGGAA CTCTGGAAAT TTTTTCGTGG
TGGGCCGGTG ACGAAGGCCC CGCGCTTGAG GCCATGATAA AGCTGTACAA CAAGCAGCAC
CCCGGCGTCA GCGTGGAAAA CGCCGCCGTC ACGGGCGGAT CGGGCATCAA CGCCCGTGCA
GTGCTTAAAA CCCGTATGCT GGGCGGCAAT CCTCCTGACA GCTTTCAGGT GCATGCAGGA
CAGGAACTCA TCGGTACGTG GGTTGCCTCG GGCCGTATGG AAGACCTGAC CTTTCTGTAC
AAACAGCAGG GCTGGATGGA AGCGTTTCCC GCCGACCTCA TCAAGCTGAT CGGCACGGAG
AACGGCATAT GGTCGGTACC GGTGACGGTT CACCGCTCCA ACGTCATGTG GTTTGTACCC
GCCAACCTGA AAAAATGGGG AATACAGGCT CCTGCCGACT GGAACGAGTT TCTGGAAATA
GCCCCGCGGC TACAGGAACA GGGCGTGGTG CCGCTTGCTC TGGCCACCAA CTGGACGGCC
AACCACCTCT GGGAATCCGT GGCGCTGGCC TCCATGGGGG CCGACCGGTG GGACGCCCTC
TGGCGCGGCG AAATTCCGTG GACCGATCCT GAAGTGGTCA AAGCATGGGA GCTTTTCGGC
AAGGTGCTGC AATACACCAA TGACGACGCC ACATCGCTTT CGTGGCAGCA GGCCACAGAC
ATGGTTGTGG ACGGCCGCGC CGCCTTCAAC GTCATGGGCG ACTGGGCTGC CGGCTACATG
AACACCACGC TGGGCATGGC ACCCGGTAAA GACTTCGGCT GGTCCGCATC GCCGGGCACC
GGCGGCGTGT TCATGTTCCT TTCCGATTCG TTCGGCCTGC CCGTGGGCGC CGCAAACCGC
GACAACAGCC TCGCGTGGCT GGCACTTGTG GGTTCGCGCA GCGGCAGCGA CGCCTTCAAC
CCGCTCAAGG GTTCCATCTC GCCCCGGCTT GATACCGACC TGAACCTGTA CAATGACTAT
TCAAAATCCG CCGCAGGCGA CTGGGGCCGC GACCGCATCG TGGGCAGTCT GGCTCACGGA
GTCACCGCCA ACGAAGGCTT CATGAGCGAT TTCGCATCCG TTATGGAGAT GTACCTGAAA
AACCGCAACG CCGGTCAGGC CGCCATGGCC TGCCACGCCA TTGCCGTAAA AAACGGCATA
GCCAGACGAT AG
|
|---|
| Protein sequence | MNRFLAKAAV AAAAFCLMIT APAMAAAQDK LGGTLEIFSW WAGDEGPALE AMIKLYNKQH
PGVSVENAAV TGGSGINARA VLKTRMLGGN PPDSFQVHAG QELIGTWVAS GRMEDLTFLY
KQQGWMEAFP ADLIKLIGTE NGIWSVPVTV HRSNVMWFVP ANLKKWGIQA PADWNEFLEI
APRLQEQGVV PLALATNWTA NHLWESVALA SMGADRWDAL WRGEIPWTDP EVVKAWELFG
KVLQYTNDDA TSLSWQQATD MVVDGRAAFN VMGDWAAGYM NTTLGMAPGK DFGWSASPGT
GGVFMFLSDS FGLPVGAANR DNSLAWLALV GSRSGSDAFN PLKGSISPRL DTDLNLYNDY
SKSAAGDWGR DRIVGSLAHG VTANEGFMSD FASVMEMYLK NRNAGQAAMA CHAIAVKNGI
ARR
|
|---|
| |