Gene Dde_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3585 
Symbol 
ID3758571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3543532 
End bp3544059 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637784506 
Productsurface presentation of antigens (SPOA) protein 
Protein accessionYP_390073 
Protein GI78358624 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.836136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AAGACGTCGA TCAGGATGCA TTGGCCGCAC AGTGGGCCGC TGCGCTGGAA 
GAGCAGGAAG GCGACGATTC CGGCGGCGGG GGCGGTACCA GCGCCGGTGA GGAACAGCTG
GCTGCGGAAT GGGCTGCCGC TCTGGCAAAC GAAGAGCAGG ACCAGTTGAA AAAAGAAAAA
GAACAGGGAT TTTACGCTTC GGCCGCGCGG GATATGGAGT TCAAAGACCT GACCGAAGAA
GCCAAATCGC CCCGTCCGGA TTCGGGCAAG CGCGAACTCG ACTTCATTCT GGATATCCCG
CTGGATGTCT CTGCCGAGCT CGGGCGTACC CGTCTGCTGA TCAACGAACT GCTCCAGCTG
GGGCAGGGTT CGGTGGTTGA ACTGAACAAA CTGGCCGGTG AACCGCTTGA AATTTATGTC
AACGGCAAGC TGGTGGCCCG CGGCGAGGCC GTGGTCATCA ACGAAAAATT CGGCGTGCGG
CTGACAGACA TCATCAGCCC CATTGAACGC GTCAAACAGC TGGGCTAG
 
Protein sequence
MAEKDVDQDA LAAQWAAALE EQEGDDSGGG GGTSAGEEQL AAEWAAALAN EEQDQLKKEK 
EQGFYASAAR DMEFKDLTEE AKSPRPDSGK RELDFILDIP LDVSAELGRT RLLINELLQL
GQGSVVELNK LAGEPLEIYV NGKLVARGEA VVINEKFGVR LTDIISPIER VKQLG