Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3585 |
Symbol | |
ID | 3758571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3543532 |
End bp | 3544059 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637784506 |
Product | surface presentation of antigens (SPOA) protein |
Protein accession | YP_390073 |
Protein GI | 78358624 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.836136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AAGACGTCGA TCAGGATGCA TTGGCCGCAC AGTGGGCCGC TGCGCTGGAA GAGCAGGAAG GCGACGATTC CGGCGGCGGG GGCGGTACCA GCGCCGGTGA GGAACAGCTG GCTGCGGAAT GGGCTGCCGC TCTGGCAAAC GAAGAGCAGG ACCAGTTGAA AAAAGAAAAA GAACAGGGAT TTTACGCTTC GGCCGCGCGG GATATGGAGT TCAAAGACCT GACCGAAGAA GCCAAATCGC CCCGTCCGGA TTCGGGCAAG CGCGAACTCG ACTTCATTCT GGATATCCCG CTGGATGTCT CTGCCGAGCT CGGGCGTACC CGTCTGCTGA TCAACGAACT GCTCCAGCTG GGGCAGGGTT CGGTGGTTGA ACTGAACAAA CTGGCCGGTG AACCGCTTGA AATTTATGTC AACGGCAAGC TGGTGGCCCG CGGCGAGGCC GTGGTCATCA ACGAAAAATT CGGCGTGCGG CTGACAGACA TCATCAGCCC CATTGAACGC GTCAAACAGC TGGGCTAG
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Protein sequence | MAEKDVDQDA LAAQWAAALE EQEGDDSGGG GGTSAGEEQL AAEWAAALAN EEQDQLKKEK EQGFYASAAR DMEFKDLTEE AKSPRPDSGK RELDFILDIP LDVSAELGRT RLLINELLQL GQGSVVELNK LAGEPLEIYV NGKLVARGEA VVINEKFGVR LTDIISPIER VKQLG
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