Gene Dde_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3570 
Symbol 
ID3758550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3526130 
End bp3527149 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID637784485 
Productthiamine-monophosphate kinase 
Protein accessionYP_390058 
Protein GI78358609 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA TGACTTCCGA AGATGCGTTT CTTGCCTGTA TTGACAGGCA CTTCTGTAAC 
GAGCACCCGC ATATGCTGCG GGGCAGAGGC GATGATTGCT GCGAACTGGC ATGTCCGCCG 
CGCATGACGC TGAGTACAGA CCTGTTCATG CAGGACACCC ATTTCCGGCT GAGCTATTTT 
TCCGCAGCGG ACATAGGGCA CAAGGCGCTG GCTGTGAATA TCAGCGATAT TGCCGCCGCG 
GGCGCCCGGC CGCTGGGATT CAGCATGGGG CTTATGGTGC CGGAAAAGCA GCCGGGGCCG 
CACCGGCTTA CCGGGGCGTT CTGGGACAGC TTGTTTGACG GCATGGCGCA GCTGGCCCGC 
AGTCACGGCA TGGCACTGAC CGGAGGCGAC CTGACCCGTG CGGGTACGTT TGGCCTGTGT 
GTGACGGTGT GGGGCGGCCC CTGCGGCGAT GCGCCTTTTT TGCGGCGCAC AGGGTGCAGA 
CCCGGCGATG CCGTTTTTCT GGCGGGCGAA GCCGGACTGG CCCGCACCGG CCTGATGGCG 
CTGGAAGCCA TGGGGGCGGA GGCTGCCGGC GAGTATCCGC ATGCTGTGGC GGCTCATCTG 
AGGCCGGTGC CGCTGGTGCG CAGCGGGCAG CGTCTTGCTG CTTTGCAGGG GGCACGGCCG 
CAGTCACGCA TCACGTTGAT GGATCTTTCC GACGGACTGG CCCGTGACCT GCCGCGTCTT 
TTTGCTGCCG GTGAGGGCAC CTGCGGTGCC TCGCTGGTTC TGCCCGATGC TTCACTGCAT 
CCAGATGTGC GCCGCTGGGC CGCAGAGCAG GGTACTGATG CCGCCGTGCA TGCGTTCTGC 
GGCGGAGAAG ATTATGCACT GCTGGGCACC TGTGCGCCCG AAGCCGTGGC CGATGTCATT 
GAGGCCGCGG CATGCGACGG GGTGCCCGTG CGGGTGCTGG GCACGGTACA CGGCGAGCCG 
GTTGTCATGC TTAACGGCGT ACCGGTTACC GGCGGCGGGT TTGATCATTT TTCCGGTTAA
 
Protein sequence
MSTMTSEDAF LACIDRHFCN EHPHMLRGRG DDCCELACPP RMTLSTDLFM QDTHFRLSYF 
SAADIGHKAL AVNISDIAAA GARPLGFSMG LMVPEKQPGP HRLTGAFWDS LFDGMAQLAR 
SHGMALTGGD LTRAGTFGLC VTVWGGPCGD APFLRRTGCR PGDAVFLAGE AGLARTGLMA 
LEAMGAEAAG EYPHAVAAHL RPVPLVRSGQ RLAALQGARP QSRITLMDLS DGLARDLPRL 
FAAGEGTCGA SLVLPDASLH PDVRRWAAEQ GTDAAVHAFC GGEDYALLGT CAPEAVADVI 
EAAACDGVPV RVLGTVHGEP VVMLNGVPVT GGGFDHFSG