| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3569 |
|---|
| Symbol | |
|---|
| ID | 3758549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3525105 |
|---|
| End bp | 3526103 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637784484 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390057 |
|---|
| Protein GI | 78358608 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
[COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAG AACTGCGCTT TATAGGTGTT GTCCGTTCTT CTCTTAAAGA TATCGGCGAT
TGCCCCAAAC AGGGGGATGA AGGCGGCGTG GAGGCATGGG TGGACATCCA TGAAGAGTAC
CGCGCCGGAC TTGATTCGCT GCGGGCGGGG CAGGGGCTGA CGCTGCTCAC ATGGCTGCAC
GAGGCCGACA GGTCGGTTCT TTCCGTTCAT CCGAGAGGCG ATACCGGTCG TCCGCGGCGC
GGGGTGTTCA ATACCCGTTC GCCTGCACGG CCCAACCCTG TGGGGCTGCA CGAGGTACGC
CTGACGGCAG TGGAAGACGG CAGGCTGAAA GTCGCCCCGC TGGAAGCGCT GGACGGTACG
CCTGTCATTG ATATCAAAAC AAGTTTTGAC CAGCGCAGCG GTACTGGCGG CGCAGCGTCG
CATGCCGCGC CGCAGGGGGC AGCCGCCGTG CTGCGGCATG CCTGCCGCAC CGCGTGGGAG
CGCGGACTGC TTTCCGGTTT TAACGGCAAC ATCAGTCTGC GCATTGACAG CGACACCTGT
CTTGTGACCT GTACCGGCTC TGTAAAGGGC GATCTGCATG CCGAAGATAC GGCGCTGGTA
CGTATAGATT CCGGCGAACG GCTGGCGGGA GGCGTACCTT CTTCGGAGAC GGCCATGCAT
CTGGCCATCT ACCGCAGCCA GCCGCAGGCG CAGGCGGTGG TGCACACGCA TCCGCCCTGC
CTGCTGGCGC TGGGCATCCG CGTGGCAGCG GACGAACTGC TGCGTATTCC GGTGTACGAG
TCGGACCTGA TACGCAGGCG CATGACATCC GTTCCCGCGC ATGCACCGGG CTCTCAGGAA
CTGGCACAGG CAGCGGGTGA GGCTGCGCGG ACGCACGAAG CGGTGTACAT GGAGCGGCAC
GGACTGGTGT GCTGGGCCGG TACCGTGCGT CAGGCGCTGG CGCTGAGTGA AGAAATAGAG
CATCTTGCCG GAATGCACCT GCATGCGTCA GGCATATAG
|
|---|
| Protein sequence | MTAELRFIGV VRSSLKDIGD CPKQGDEGGV EAWVDIHEEY RAGLDSLRAG QGLTLLTWLH
EADRSVLSVH PRGDTGRPRR GVFNTRSPAR PNPVGLHEVR LTAVEDGRLK VAPLEALDGT
PVIDIKTSFD QRSGTGGAAS HAAPQGAAAV LRHACRTAWE RGLLSGFNGN ISLRIDSDTC
LVTCTGSVKG DLHAEDTALV RIDSGERLAG GVPSSETAMH LAIYRSQPQA QAVVHTHPPC
LLALGIRVAA DELLRIPVYE SDLIRRRMTS VPAHAPGSQE LAQAAGEAAR THEAVYMERH
GLVCWAGTVR QALALSEEIE HLAGMHLHAS GI
|
|---|
| |