| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3564 |
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| Symbol | |
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| ID | 3758544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 3522659 |
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| End bp | 3523498 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637784479 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_390052 |
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| Protein GI | 78358603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.490647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTC CGCGCATTCC ACGGCAGCTT TACGGCATCA TCGGATATCC TCTGGGCCAC
TCCATGAGCC CCTTGCTGCA TAACTGGGGC TTTGAACTGC TGGGCGAGCA GGCCGCCTAT
ATGGCTTTTC CCGTGGCGCC TGAAAAACTG GCGGAATTCA TCTGCTGTGC ACGTATGCTT
CCTGTATCCG GGCTCAGTGT GACCATACCG CATAAGCAGG CGGTCATGCC GCTGCTGGAC
GCGGTGACCC CCCGTGCGCA GGCTGCCGGC GCGGTGAACA CGCTTTTTTA TGATGATGGA
AAACTGACCG GCGATAATAC GGATGTGTAC GGCTTTCTGC ATCCGCTGGA TTCGTGCGGT
ACGGCGCATG CTGCCGCGCT GGTGCTGGGA GCCGGCGGGG CGGCCAATGC CGTGCTGGCC
GCACTGACTG CGCGGGGCAT GTGCAATGTG ACAGTGACCA ACCGCAACGG CGACCGCGCC
CGTATTCTGG CAGAGCGTTT CGGGGTGCGC TGCGTGGCGT GGGAGGAACG CCATGCCGTG
GATGCGGATC TTGTGGTAAA CACCACACCG CTGGGCATGG CCGGAGACCG GCAGGCGCAG
ACGCCGCTTG ATCCGGCATT TTTCAGCTCC CGGCCCGCGG GGCTGGCCTA TGATCTTATA
TACAATCCTG CACAGACATT TTTTCTGGCA TCGGCACAGG CGGCAGGCTG GCGGGTGTTG
AACGGGCTGG ACATGTTTGT CGCACAGGGG GCGGAACAAT TCCGCATCTG GCGCGGTCGT
GAGCTGCCCT TTGCGCAGGC ACGCGCGCTT ATCGCAGACG CGCTGGCTTC AGGCTGCTGA
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| Protein sequence | MTIPRIPRQL YGIIGYPLGH SMSPLLHNWG FELLGEQAAY MAFPVAPEKL AEFICCARML
PVSGLSVTIP HKQAVMPLLD AVTPRAQAAG AVNTLFYDDG KLTGDNTDVY GFLHPLDSCG
TAHAAALVLG AGGAANAVLA ALTARGMCNV TVTNRNGDRA RILAERFGVR CVAWEERHAV
DADLVVNTTP LGMAGDRQAQ TPLDPAFFSS RPAGLAYDLI YNPAQTFFLA SAQAAGWRVL
NGLDMFVAQG AEQFRIWRGR ELPFAQARAL IADALASGC
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