Gene Dde_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3535 
Symbol 
ID3758514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3492760 
End bp3493992 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content54% 
IMG OID637784449 
Producthistidine kinase 
Protein accessionYP_390023 
Protein GI78358574 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA AAACAACCAT AGAAGACCTT GTCGGCATTG AACACAGCAA GCTGAATTTT 
TTTCAGGAAC TCCAGCAGAG CATTGAGGAA CTGAAAGAAA GCAACAAGGA GCTGGAGGAA
CAGCGCCGCG AAACAGCCGC CATCCTTGAC GGCATTACCG ATGTGATGAT GGTGCTTTCC
GAAGACCTGC GCATCATCTC GGTAAACCAT GTGTTCATGC AGCTGTTCCC CGACAGCGAC
CCCCACGGAC AGTACTGCTA CAAATACTTC AGGCATTCCC ACACCCCCTG CCGCGAGTGT
CCCGCGTTCC GCTCGCTCAG CACAGACACG GTATGCCGCG AGACTGCCAT TTTCCGCATC
AACGGACGCA ACATGCAGTT CGAGATGGTG GCATCGCCGC TTAAAAGCCC GTACCTGCCC
GAACACCGCG TGCTCATTTT CAAACGCGAT GTGACACTGG AAAAAGAATA TCAGGCGAAA
TTCTATCAGG CCGAAAAAAT GGCCACCATG GGTGTGCTGG CAGCCGGTGT CGCACACGAG
ATAAACAACC CCCTTACGGC GGTGACAGGC TTTGCCGAAG GCATCCGGCG TCGTCTGCCC
AAGCTGCGCG GACTGGTGGA TGACCAGCTG TTCACCGACT TTCAGGAATA CACCGACACC
ATTCTCAAAG AATGTCTGCG CTGTCAGGAC ATCGTACAGA CTCTTCTGAC CTTCAGCCGT
CCCTCCTCGG CGGAGTTTTC GCAGCTCAGT CTCAACTCCG TGGTTTCGGA AACAGTCTGG
CTGCTGCACA ACCACTTCAA AAAGCATCAC AACATCAAGG TCAATCTGAA CCTTGACGAA
ACCGTACCTC ATATTTTCGG CGACGAAGCC CAGCTGAAAC AGGTGGTGCT CAATCTGCTG
ACCAATGCGC TCGACTCCAT GAGCGAAACC GGAAACAAAG ACCGCTGCTA CTTTTCCGGC
GTGCTGGCCG TGGAAACAGC CCCCTTCGGC GAAAGCGGCG CAAAACTCAT TGTCAGCGAC
ACGGGCTGCG GTATTCCGCC GGACAACATA GACAAACTTT TCGAACCCTT CTTCACCACC
AAAAATGTGG GCAAGGGCAT CGGCATCGGT CTTTCCACCT GTTATTCCAT AGTCCGCAAG
CACGGCGGCG AAATAACCGT CACAAGCACG GAAGGCAAAG GATCGCAATT CACCGTAACG
CTACCCGGCA ACCGCGGAGA ACAACGTGTC TGA
 
Protein sequence
MKGKTTIEDL VGIEHSKLNF FQELQQSIEE LKESNKELEE QRRETAAILD GITDVMMVLS 
EDLRIISVNH VFMQLFPDSD PHGQYCYKYF RHSHTPCREC PAFRSLSTDT VCRETAIFRI
NGRNMQFEMV ASPLKSPYLP EHRVLIFKRD VTLEKEYQAK FYQAEKMATM GVLAAGVAHE
INNPLTAVTG FAEGIRRRLP KLRGLVDDQL FTDFQEYTDT ILKECLRCQD IVQTLLTFSR
PSSAEFSQLS LNSVVSETVW LLHNHFKKHH NIKVNLNLDE TVPHIFGDEA QLKQVVLNLL
TNALDSMSET GNKDRCYFSG VLAVETAPFG ESGAKLIVSD TGCGIPPDNI DKLFEPFFTT
KNVGKGIGIG LSTCYSIVRK HGGEITVTST EGKGSQFTVT LPGNRGEQRV