| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3499 |
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| Symbol | |
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| ID | 3758477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 3456951 |
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| End bp | 3460220 |
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| Gene Length | 3270 bp |
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| Protein Length | 1089 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637784412 |
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| Product | ATP-dependent DNA helicase UvrD |
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| Protein accession | YP_389987 |
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| Protein GI | 78358538 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGT TTAGGGCCGA CCTGCATATA CATTCCCGTT TTTCCCGCGC CACAAGCAAA
AAACTCACTG CCCGTCATCT GGCGGCATGG GCGGCCGTCA AAGGGCTGGA TGTGCTGGGT
ACGGGAGACT TCACCCACCC CCAGTGGCGC GAGGAACTGG CCGCACAGCT GATTCCCGAC
GACAATACCG GCCTGTTGCG CCTGCGTGAA GCGGACGGGC TGGACGAAGA GATTTCTGTT
TTTGCAGGGC GCCCGCTGGG CGGCCGTGTG CAGTTCATGC TGCAGGCCGA AATAAGCTCT
ATCTACAAAC GGGGCGGCAA GGTGCGCAAG GTGCACAACC TTGTTTATGT GCCCACGCTG
GAAGCTGCGG AGTCACTGTC GCGCAAGCTT GAGCAGGTGG GCAATCTCGC TTCCGACGGG
CGGCCCATTC TGGGGCTTGA TTCGCGCGAC CTGCTTGAGA TGGTGCTGGA AACCCACCCC
AGAGCATTTC TTGTGCCCGC GCATATCTGG ACTCCGTGGT TTTCCGTGTT CGGGTCAAAA
TCCGGCTTTG ATTCCATAGA AGAATGCTAC GGTGATCTGT CAGCGGAAAT ATTTGCGCTG
GAAACAGGTC TGAGCTCCGA TCCGGACATG AACTGGATGT GGAGTGCGCT GGACCGGTTC
CGGCTTATCT CCAACTCGGA CGCGCATTCC GGCGACAAAC TGGGGCGCGA GGCCAACCTG
TTCAGCGGAG ACGTTTCCTA CGACGGCATT TACAGGGCAT TGCGCGGTGA AGGACTGGGG
CACCGGTTTC TGGGCACGCT GGAATTTTTT CCCGAAGAAG GCAAATACCA CATGGACGGC
CACCGCAAGT GCGGTGTCAT CATGGACCCG CGTGAAACGG CGGCCAGAGA CGGCATATGC
CCCGTTTGCG GCAAGCCGCT CACCGTGGGG GTGCTGAGCC GTGTCATGGA GCTGGCGGAC
AGAGAAATGC CTGAACGACC GGCGGGACAG CCCGGTTTCA TTTCGCTGGT GCCTCTGGCA
GAGGTCATAT CCGAAATTGT CGGCACCAGA CCGGGCACCC GCAAGGTACT TGATTTTTAT
GCAGGCGCCG TATCGCGGTT CGGTTCGGAG CTGGGTATTC TGCAGGATGT GCCGGAAGAA
GATCTGAGGA CATTTTCCGC GCCGCTGGCT GAAGGCATTT CGCGCATGCG CCGCGGCGAG
GTTGCGCGGC AGCCGGGTTG CGACGGCGAA TACGGGGTTA TCAGCGTGTT CACCCCGCGT
GAGCGTGATG AGTTTAAAAA CGGCCGCATG CTGATGGACC TGCCCTTGCC CGCTTGTGGC
ACGACGCGCA CGGCGGAACC CGCCGCGGCT GCAGATGCTG TGCCGCAGGA CGGCGGCGGA
AACGGGCCGG AAACGCAGGC TGCGGCGTCC GGCGGAACGG CGGGTGCGGC CCTGCAGGAC
GCTGATGCCG GTGTGCAGGG TGTTTCCGAC GAATTTATTT TTGAAGACGA CGAGGCTGGG
GAGCAGCCGC AGGGAGCCAA CGAGGCCCAG CAGCGGGCCA TGGACGCCGG ACCGGAACCG
GTGCTGGTGC TTGCCGGACC GGGAACGGGC AAGACCCGCA CGCTGGTGGG GCGCATCCGC
AGACTGGTGG ATAACGGGGT TTCTCCGCGG CAGATACTGG CAGTGACATT CACACGCCGT
GCCGCGACAG AGATGGACGG CAGGCTGCTG GCCGAGCTTG GGGGTAATGC GGCGCTGCCC
CGTACCGACA CCCTGCATGC GCTGGCCTTT GAATACTGGC ACAAAGCCTA TGACGATGCG
CCGGTGCTGC TTTCGGAAGA CGGCGCGCGG CGTGTGTTTG CCGAGGCCAA TTCCGGCGAG
ACCGCGCAGC GGATACGGGA AGCGTGGGAA CGCATAGCCG TGTGCCGCGA ACGCATGTCC
GTTTGCCATA CGGATGATGC CCCGTTTCTG CACAGGTATG TGAAGCTCAA GGAATCGTGG
AATCTTGCCG ATTATACCGA CCTGCTGGAA TTCTGGCTGG AGCAGGTGAA CAACGGTATT
TACGCCTGTC CGTATGTGCA TGTGCTGGTG GATGAAATTC AGGATCTTTC ACCTCTGCAG
CTTACACTGG TGCGTTCTCT GCTGCCTGAA AACGGCGCGG GGTTCTTCGG CATAGGCGAC
CCTGATCAGT CCATCTACGG TTTCCGGGGG GCGCACGGCG ATGTGCGTGC GTTTTTCGGT
GCGGCGTGGC CGGATATGCA GGTGATCAAA CTGACCCGTA ACTACAGATC TTCTCAGGCC
ATACTTGATT TTTCGGCTGC TCTGCTGCCG CAGGACCCGC CGCTGGTTGC CATGCGTGCG
CTGCCGGGCG AGATACGGCT TTTTGAAGCG CCCACGGCAG AAGGTGAAGC CTCCTGGATT
GCCGGGCAGA TACGTTCGCT TATCGGCGCC ACAAGCCATT CTCTGGCCGA CAGCGGGGCC
ACCCGCCTGA AAAGCGGCGG GCATGACGAC GATGTGAGCG GTATGGCCGG TGCTCTCGCC
CCCGGCGACA TTGCGGTACT GGTACGCTTC AAGGCGGTTA TTCCTGTTAT CCAGCGCACG
CTTGTCCGGC TGGGCATACC CTGCTCCGTG CCCGAGGCCG AAGCTTTCTG GGTGGAGCCC
CGCATACAGA TGATTCTGGC CGCGGCGGGC CGTGTGCTGG GCATTGCCTA CCGGTCGGAA
GAAGAAACCA TTTCGTGCCC CGACAAGGTG CTGGCCAAAG GACCTCTCGG GGTTTCGGCG
TATCTGCAGG ACATGCCGCC TTTTGATAAT CTGTTCTGGC AGTCTCCGGA GTTCAGGCGT
CTGGTGAAAG CTTATGACGA GTACGGGGGC TGGGCGGGTC TGCTTAACTG GGTGCACCTG
CAGACAGAGC TTGAACTGGT GCGCAGCCGC AGCGAAAAAG TACAGATAAT GTCGCTGCAT
GCGGCAAAAG GTCTTGAATT TAAAGCGGTA TTTCTGCCTG CGCTGGAAGA CGGCATACTG
CCTTTTGCCA GCGCGGGCGT GTTGACGGGC AGCGTGGACA AGGCCCGCAT GCGCACGGAT
ACGGAGGAAG AACGCAGACT GTTGTATGTG GGGATGACCC GTGCAGAACA GGCGCTGTTT
CTCAGCCGCG CGGCGCGGCG GATGCTCTAC GGCAAGGAAC TGCGGCTCAG GGAATCACGG
TTTCTTCAGG GGCTGCCGCT GGGCGACCTG CGCCGTTCGA CGCTGGTGGC GCACCAGAAG
CGCAAGGAAA AACAGCTGAC ATTGATGTGA
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| Protein sequence | MKQFRADLHI HSRFSRATSK KLTARHLAAW AAVKGLDVLG TGDFTHPQWR EELAAQLIPD
DNTGLLRLRE ADGLDEEISV FAGRPLGGRV QFMLQAEISS IYKRGGKVRK VHNLVYVPTL
EAAESLSRKL EQVGNLASDG RPILGLDSRD LLEMVLETHP RAFLVPAHIW TPWFSVFGSK
SGFDSIEECY GDLSAEIFAL ETGLSSDPDM NWMWSALDRF RLISNSDAHS GDKLGREANL
FSGDVSYDGI YRALRGEGLG HRFLGTLEFF PEEGKYHMDG HRKCGVIMDP RETAARDGIC
PVCGKPLTVG VLSRVMELAD REMPERPAGQ PGFISLVPLA EVISEIVGTR PGTRKVLDFY
AGAVSRFGSE LGILQDVPEE DLRTFSAPLA EGISRMRRGE VARQPGCDGE YGVISVFTPR
ERDEFKNGRM LMDLPLPACG TTRTAEPAAA ADAVPQDGGG NGPETQAAAS GGTAGAALQD
ADAGVQGVSD EFIFEDDEAG EQPQGANEAQ QRAMDAGPEP VLVLAGPGTG KTRTLVGRIR
RLVDNGVSPR QILAVTFTRR AATEMDGRLL AELGGNAALP RTDTLHALAF EYWHKAYDDA
PVLLSEDGAR RVFAEANSGE TAQRIREAWE RIAVCRERMS VCHTDDAPFL HRYVKLKESW
NLADYTDLLE FWLEQVNNGI YACPYVHVLV DEIQDLSPLQ LTLVRSLLPE NGAGFFGIGD
PDQSIYGFRG AHGDVRAFFG AAWPDMQVIK LTRNYRSSQA ILDFSAALLP QDPPLVAMRA
LPGEIRLFEA PTAEGEASWI AGQIRSLIGA TSHSLADSGA TRLKSGGHDD DVSGMAGALA
PGDIAVLVRF KAVIPVIQRT LVRLGIPCSV PEAEAFWVEP RIQMILAAAG RVLGIAYRSE
EETISCPDKV LAKGPLGVSA YLQDMPPFDN LFWQSPEFRR LVKAYDEYGG WAGLLNWVHL
QTELELVRSR SEKVQIMSLH AAKGLEFKAV FLPALEDGIL PFASAGVLTG SVDKARMRTD
TEEERRLLYV GMTRAEQALF LSRAARRMLY GKELRLRESR FLQGLPLGDL RRSTLVAHQK
RKEKQLTLM
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