Gene Dde_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3466 
Symbol 
ID3758444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3427108 
End bp3428097 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content54% 
IMG OID637784379 
ProductADP-glyceromanno-heptose 6-epimerase precursor 
Protein accessionYP_389954 
Protein GI78358505 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATAG TCACAGGTGG CGCAGGATTT ATCGGCAGCG CCATGGTCTG GAAGCTCAAC 
ACCATGGGCA TAGACAATAT TCTGGTGGTG GATAATCTGG CCAGTACGGA AAAATGGAAG 
AATCTCGTAA ATCTGCGGTA TGTCGATTAC ATGCACCGCG ATGCATTTCT CGATCTGCTG 
CTGGATGACT GCCTGCCGTG GAACGTGAAG GGCATTGTGC ATATGGGCGC CTGCTCTTCC 
ACCACGGAAC GCGACGCTGA TTTTCTGATG GAGAACAACT ATCGCTATAC CAAAGCCCTG 
TGTGATTTTG CCCTGCAGCA TGGCGCGCGT TTTATCAATG CCAGCTCGGC AGCCACCTAC 
GGCGACGGCT CATGCGGGTT TGATGATTCC GTGGAAACCA TGCACCGCAT CAAGCCGCTG 
AACATGTACG GCTATTCCAA ACAGCTGTTT GACCTGCGCG CCCATGCCGA AGGCAAGCTG 
GACAGCATAG CCAGCCTGAA ATTTTTCAAT GTTTACGGTC CCAACGAATA CCATAAGGAC 
GATATGCGTT CGGTGGTGTG TAAGGCTTTT TCACAGATAG GTTCCGAAGG GGTCATGCGT 
CTTTTCCGCT CGTATCACCC CGATTATCCC GACGGCGGGC AGAAGCGTGA TTTTGTATAC 
GTGAAAGACT GCGTGGACGT GATGTGGTGG CTGCTGGAAA ATCCTTCCGC CAACGGGCTG 
TTCAATATCG GCACCGGCAA CGCCCGTACG TGGAACGATC TGGCGCGGGC GGTGTTCAGC 
GCCATGGACG TGCCCGAACG CATCGAATAC ATCGATATGC CCGAGCAGCT GCGCGGCAAA 
TACCAGTATT ACACGCAGGC TCCCGTGCAG CGGCTGGCTG ATGCCGGTTG TCCGGTGACG 
TTCCGTTCGC TGGAAGACGG TGTTAAGGAT TATGTGCAGA ATTATCTTGC AGCGGAAGAT 
CCGTATCTCG ACCCCCGTGC AGGGGTATAG
 
Protein sequence
MYIVTGGAGF IGSAMVWKLN TMGIDNILVV DNLASTEKWK NLVNLRYVDY MHRDAFLDLL 
LDDCLPWNVK GIVHMGACSS TTERDADFLM ENNYRYTKAL CDFALQHGAR FINASSAATY 
GDGSCGFDDS VETMHRIKPL NMYGYSKQLF DLRAHAEGKL DSIASLKFFN VYGPNEYHKD 
DMRSVVCKAF SQIGSEGVMR LFRSYHPDYP DGGQKRDFVY VKDCVDVMWW LLENPSANGL 
FNIGTGNART WNDLARAVFS AMDVPERIEY IDMPEQLRGK YQYYTQAPVQ RLADAGCPVT 
FRSLEDGVKD YVQNYLAAED PYLDPRAGV