| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3465 |
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| Symbol | |
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| ID | 3758443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3425558 |
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| End bp | 3427027 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637784378 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_389953 |
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| Protein GI | 78358504 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCG CACCGGCACA ACAGGCCACG GTACTTACGG TGGAAGATGA CCCTGTCATC
CGCGAAACCA TAGCAGCCTG GCTGGAGGAT TCCGGCCTGA CCGTGCTGCA GGCCGAAGAC
GGCAGCAAAG GTCTGGACGT TTTCCGCAGG CACACACCAG ACCTTGTACT GCTGGATCTC
GGCATTCCCG GCATGAGCGG TGAAAGCCTG CTCAAGCTCA TGGTGCAGGA ACAGCCCGAC
ACGCCGGTCA TCATCGTTTC CGGCACGGCG GAAATAGACG CCGCCATCAG CGCCTTCAAG
AACGGCGCAT GGGATTTCAT CACCAAACCC GTGCCCAATA TGGAACTGCT GGAAAAAACC
GTGCGGAACT GTCTGGAACG CAAATCACTG CGCGAACGGC TGGACGCCGC AGAGACCCGC
TATTTCCAGT TCATCCAGCA TCTGCCCGTG ACGGTGTTTT CCATGGACGG CAGCATGCAG
GTCACATGGC TCAATGCCGC ATGCCCCAGA GTGCTGGGCT GGCCCGTGGC AGAAGCGCTG
GGGACGGAAA ACTGGTTCAT GGATAACGTG CACCCGCCGG ACAGGCCCGC ACTGCAACAG
GCACTGGAAG CCGCGCTGCA GCGCGGGAAC GACATTTTCT GCGAATTTTC ATTCCGCCAC
CGCCACGGCT ACCTTATCCG CCTGCAGGCG CGCTCCACAT CCGTATCTGC TCCGGACGCT
GCGCGCGCGG GCAGAATCGA AGGCGTTCTG CTTGATATCA CCGACCGCGA TTTTCTGGAT
AAGGTGCTTG TGCAGCGCGA AAAACTGAAC ACGCTGGGAG CCATGGCCGA TGAAGTGGCC
CATGAATTCC GCAACCCGCT GTTTGCGCTG GGCGGTTTTG CACGCAGACT GCATACGCGC
ATGCCCGACA TCATGGAGGC CGGCATCATT CTGGAAGAAG CAAAACGCAT GGAAACCATG
CTGGACAGGC TAAAAGAGTA CACCAGCCCT GTGGACGTCT CGCCGGAACC CACCAATGTC
AACACATCCG TCAATTTTGC GCTGGACAGG CTGGAACCTC AGATAGCCAG ACGCCGGGCG
GCCGTTTCCA GCAATCTGGA AGCCGGCATG CCGGAAATAC AGTCCGATCC CGACATTCTG
CTGCAGGTGC TCATGAATCT GGTGACCAAC CTGCTGGATG CCATGCCTGA AGGCGAAACG
CTGCGGCTGA TCACCTCACA AAGTGCCGGA ACACAGGAAG TGACGCTCAT GGCACCGGTG
CAGGGCACGC CCATGGCCGA CCCCGAACAG CTGCTGCTGC CCTTTGACGT TTCCGGACCG
CAAAGAAACC TTGCGGTAAG TTACCGGCTG GTAAAAACCA TCGGCGGGCT GCTGTCCGTC
ACCCGCAGCC ACAACGTGCA TACGCTTACT CTTTCGCTGC CCGCCGGACA CGACAGCCGC
GTACCCGGCA CGGGTGCCGG TGCTTCCTGA
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| Protein sequence | MQTAPAQQAT VLTVEDDPVI RETIAAWLED SGLTVLQAED GSKGLDVFRR HTPDLVLLDL
GIPGMSGESL LKLMVQEQPD TPVIIVSGTA EIDAAISAFK NGAWDFITKP VPNMELLEKT
VRNCLERKSL RERLDAAETR YFQFIQHLPV TVFSMDGSMQ VTWLNAACPR VLGWPVAEAL
GTENWFMDNV HPPDRPALQQ ALEAALQRGN DIFCEFSFRH RHGYLIRLQA RSTSVSAPDA
ARAGRIEGVL LDITDRDFLD KVLVQREKLN TLGAMADEVA HEFRNPLFAL GGFARRLHTR
MPDIMEAGII LEEAKRMETM LDRLKEYTSP VDVSPEPTNV NTSVNFALDR LEPQIARRRA
AVSSNLEAGM PEIQSDPDIL LQVLMNLVTN LLDAMPEGET LRLITSQSAG TQEVTLMAPV
QGTPMADPEQ LLLPFDVSGP QRNLAVSYRL VKTIGGLLSV TRSHNVHTLT LSLPAGHDSR
VPGTGAGAS
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