Gene Dde_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3425 
Symbol 
ID3758402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3388615 
End bp3389787 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content53% 
IMG OID637784337 
Productrestriction endonuclease S subunits-like 
Protein accessionYP_389913 
Protein GI78358464 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.835151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC AATCCCTGAA GCCCGGCTGG AAGATGGTGA AGTTCGGCGA GGTGGTGAAG 
AACGCCAACC TCGTGGAGCG TGAGCCCGAG GCCAATGGCG TTGAAAAAAT CGTCGGGCTT
GAACACATCG ACCCCGAGAA TCTGCATGTC CGGCGCTGGA ACTCTGTTGT GGATGGCACC
TCGTTTACCC GCAAATTCGT GCCGGGGCAG ACGCTCTTCG GCAAGCGCCG GGCTTATCAA
CGCAAGGTCG CCTATGCCGA GTTTGAAGGT ATTTGCTCCG GGGATATCCT GACGTTCGAG
CCGAAAAACA GAAAGGTTCT GCTGCCGGAA CTTCTGCCGT TTATCTGCCA GAGTGATGCC
TTTTTCGATC ATGCGCTTGA TACCTCGGCC GGATCGCTGT CGCCGAGAAC CAGTTGGACG
GCATTGAAGG ACTTTGAATT CCCGCTGCCG CCCATTGATG AGCAGAAGCG TATTGCCGAG
ATCCTGTGGG CTGCGGATGA GGCGGTGGAG CAATGGACGG AAGCTTATCG ACAGGCTGAA
TTAGCCCTGA ATTCAACGCG GAGCCAGATC CTTCAAGAGC TTTCTCAGAC GGAAGTATGT
GTCTCCTTAA AAGATGTTGG CCGATGGGTT AGTGGTGGAA CGCCATCACG CAGCCGAAGT
GATTTCTGGA ATGGCGATTT TCCGTGGGTC AGCCCGAAGG ATATGAAGCA GGATGTCATA
TCCGACTCCG AGGAGAAACT TACTGATACA GCTTTGAATG GGCGAGTAAC CATCCTGCCT
TCGGAAAGCA TTCTCATAGT TGTTCGCGGG ATGATTCTTG CCCACACATT CCCGGTCGCA
CTCACCGGCA GGGAGGTTAC GTTCAATCAG GATATGAAGG GCATTATCCC CAACTCTGAT
TTTTCGGCTG AATTTGTATT TCACTGGTTC AAAGACAATT CCACAAGAAT TCTGCAAGCA
ACAGAAGAGA GCACGCACGG CACAAAGCGC CTTGCAACGG ATGTCTTGTA CGGGATGCAA
ATACCTAAAC CATCGCCGGC AAAGCAGGAA ATGGCAGTGA CTGTCTTCGA AACTTTTCGC
ACCAAGCTGG CTGAAATTTC GGAGCATATC GCCTCTTCTC AGCAGATGTT GCGCAGTCTG
AGGAATGCAA AAGCAGGAGC CGCCCATGTT TAA
 
Protein sequence
MSTQSLKPGW KMVKFGEVVK NANLVEREPE ANGVEKIVGL EHIDPENLHV RRWNSVVDGT 
SFTRKFVPGQ TLFGKRRAYQ RKVAYAEFEG ICSGDILTFE PKNRKVLLPE LLPFICQSDA
FFDHALDTSA GSLSPRTSWT ALKDFEFPLP PIDEQKRIAE ILWAADEAVE QWTEAYRQAE
LALNSTRSQI LQELSQTEVC VSLKDVGRWV SGGTPSRSRS DFWNGDFPWV SPKDMKQDVI
SDSEEKLTDT ALNGRVTILP SESILIVVRG MILAHTFPVA LTGREVTFNQ DMKGIIPNSD
FSAEFVFHWF KDNSTRILQA TEESTHGTKR LATDVLYGMQ IPKPSPAKQE MAVTVFETFR
TKLAEISEHI ASSQQMLRSL RNAKAGAAHV