Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3425 |
Symbol | |
ID | 3758402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3388615 |
End bp | 3389787 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637784337 |
Product | restriction endonuclease S subunits-like |
Protein accession | YP_389913 |
Protein GI | 78358464 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.835151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACAC AATCCCTGAA GCCCGGCTGG AAGATGGTGA AGTTCGGCGA GGTGGTGAAG AACGCCAACC TCGTGGAGCG TGAGCCCGAG GCCAATGGCG TTGAAAAAAT CGTCGGGCTT GAACACATCG ACCCCGAGAA TCTGCATGTC CGGCGCTGGA ACTCTGTTGT GGATGGCACC TCGTTTACCC GCAAATTCGT GCCGGGGCAG ACGCTCTTCG GCAAGCGCCG GGCTTATCAA CGCAAGGTCG CCTATGCCGA GTTTGAAGGT ATTTGCTCCG GGGATATCCT GACGTTCGAG CCGAAAAACA GAAAGGTTCT GCTGCCGGAA CTTCTGCCGT TTATCTGCCA GAGTGATGCC TTTTTCGATC ATGCGCTTGA TACCTCGGCC GGATCGCTGT CGCCGAGAAC CAGTTGGACG GCATTGAAGG ACTTTGAATT CCCGCTGCCG CCCATTGATG AGCAGAAGCG TATTGCCGAG ATCCTGTGGG CTGCGGATGA GGCGGTGGAG CAATGGACGG AAGCTTATCG ACAGGCTGAA TTAGCCCTGA ATTCAACGCG GAGCCAGATC CTTCAAGAGC TTTCTCAGAC GGAAGTATGT GTCTCCTTAA AAGATGTTGG CCGATGGGTT AGTGGTGGAA CGCCATCACG CAGCCGAAGT GATTTCTGGA ATGGCGATTT TCCGTGGGTC AGCCCGAAGG ATATGAAGCA GGATGTCATA TCCGACTCCG AGGAGAAACT TACTGATACA GCTTTGAATG GGCGAGTAAC CATCCTGCCT TCGGAAAGCA TTCTCATAGT TGTTCGCGGG ATGATTCTTG CCCACACATT CCCGGTCGCA CTCACCGGCA GGGAGGTTAC GTTCAATCAG GATATGAAGG GCATTATCCC CAACTCTGAT TTTTCGGCTG AATTTGTATT TCACTGGTTC AAAGACAATT CCACAAGAAT TCTGCAAGCA ACAGAAGAGA GCACGCACGG CACAAAGCGC CTTGCAACGG ATGTCTTGTA CGGGATGCAA ATACCTAAAC CATCGCCGGC AAAGCAGGAA ATGGCAGTGA CTGTCTTCGA AACTTTTCGC ACCAAGCTGG CTGAAATTTC GGAGCATATC GCCTCTTCTC AGCAGATGTT GCGCAGTCTG AGGAATGCAA AAGCAGGAGC CGCCCATGTT TAA
|
Protein sequence | MSTQSLKPGW KMVKFGEVVK NANLVEREPE ANGVEKIVGL EHIDPENLHV RRWNSVVDGT SFTRKFVPGQ TLFGKRRAYQ RKVAYAEFEG ICSGDILTFE PKNRKVLLPE LLPFICQSDA FFDHALDTSA GSLSPRTSWT ALKDFEFPLP PIDEQKRIAE ILWAADEAVE QWTEAYRQAE LALNSTRSQI LQELSQTEVC VSLKDVGRWV SGGTPSRSRS DFWNGDFPWV SPKDMKQDVI SDSEEKLTDT ALNGRVTILP SESILIVVRG MILAHTFPVA LTGREVTFNQ DMKGIIPNSD FSAEFVFHWF KDNSTRILQA TEESTHGTKR LATDVLYGMQ IPKPSPAKQE MAVTVFETFR TKLAEISEHI ASSQQMLRSL RNAKAGAAHV
|
| |